Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc9Q8VC31 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.55■□□□□ 0.24
Ccdc9Q8VC31 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.55■□□□□ 0.24
Ccdc9Q8VC31 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc9Q8VC31 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Ccdc9Q8VC31 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc9Q8VC31 Gm38376-201ENSMUST00000195493 2253 ntBASIC16.55■□□□□ 0.24
Ccdc9Q8VC31 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc9Q8VC31 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc9Q8VC31 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc9Q8VC31 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc9Q8VC31 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc9Q8VC31 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc9Q8VC31 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc9Q8VC31 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc9Q8VC31 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc9Q8VC31 Gm43102-201ENSMUST00000201004 2324 ntBASIC16.54■□□□□ 0.24
Ccdc9Q8VC31 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc9Q8VC31 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc9Q8VC31 Gm10176-201ENSMUST00000159707 2264 ntBASIC16.54■□□□□ 0.24
Ccdc9Q8VC31 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC16.54■□□□□ 0.24
Ccdc9Q8VC31 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc9Q8VC31 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc9Q8VC31 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc9Q8VC31 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.54■□□□□ 0.24
Ccdc9Q8VC31 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc9Q8VC31 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.54■□□□□ 0.24
Ccdc9Q8VC31 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
Ccdc9Q8VC31 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc9Q8VC31 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC16.54■□□□□ 0.24
Ccdc9Q8VC31 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc9Q8VC31 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc9Q8VC31 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Ccdc9Q8VC31 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc9Q8VC31 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Ccdc9Q8VC31 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc9Q8VC31 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.54■□□□□ 0.24
Ccdc9Q8VC31 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.54■□□□□ 0.24
Ccdc9Q8VC31 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc9Q8VC31 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.54■□□□□ 0.24
Ccdc9Q8VC31 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc9Q8VC31 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc9Q8VC31 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc9Q8VC31 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc9Q8VC31 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc9Q8VC31 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc9Q8VC31 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc9Q8VC31 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc9Q8VC31 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc9Q8VC31 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC16.53■□□□□ 0.24
Ccdc9Q8VC31 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc9Q8VC31 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc9Q8VC31 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc9Q8VC31 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc9Q8VC31 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc9Q8VC31 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc9Q8VC31 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC16.53■□□□□ 0.24
Ccdc9Q8VC31 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Ccdc9Q8VC31 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc9Q8VC31 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc9Q8VC31 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc9Q8VC31 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc9Q8VC31 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC16.53■□□□□ 0.24
Ccdc9Q8VC31 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16.53■□□□□ 0.24
Ccdc9Q8VC31 Ank2-226ENSMUST00000189368 339 ntBASIC16.53■□□□□ 0.24
Ccdc9Q8VC31 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc9Q8VC31 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc9Q8VC31 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc9Q8VC31 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc9Q8VC31 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Ccdc9Q8VC31 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc9Q8VC31 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc9Q8VC31 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc9Q8VC31 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc9Q8VC31 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc9Q8VC31 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc9Q8VC31 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc9Q8VC31 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc9Q8VC31 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc9Q8VC31 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc9Q8VC31 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc9Q8VC31 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc9Q8VC31 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc9Q8VC31 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc9Q8VC31 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc9Q8VC31 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc9Q8VC31 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc9Q8VC31 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc9Q8VC31 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.52■□□□□ 0.24
Ccdc9Q8VC31 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.52■□□□□ 0.24
Ccdc9Q8VC31 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc9Q8VC31 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc9Q8VC31 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc9Q8VC31 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Ccdc9Q8VC31 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC16.52■□□□□ 0.24
Ccdc9Q8VC31 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Ccdc9Q8VC31 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ccdc9Q8VC31 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ccdc9Q8VC31 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ccdc9Q8VC31 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.52■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms