Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Rpp40Q8R1F9 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rpp40Q8R1F9 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rpp40Q8R1F9 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Rpp40Q8R1F9 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.73□□□□□ -0.05
Rpp40Q8R1F9 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.73□□□□□ -0.05
Rpp40Q8R1F9 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rpp40Q8R1F9 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.73□□□□□ -0.05
Rpp40Q8R1F9 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rpp40Q8R1F9 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rpp40Q8R1F9 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.73□□□□□ -0.05
Rpp40Q8R1F9 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.73□□□□□ -0.05
Rpp40Q8R1F9 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.73□□□□□ -0.05
Rpp40Q8R1F9 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.73□□□□□ -0.05
Rpp40Q8R1F9 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.73□□□□□ -0.05
Rpp40Q8R1F9 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rpp40Q8R1F9 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rpp40Q8R1F9 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.73□□□□□ -0.05
Rpp40Q8R1F9 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rpp40Q8R1F9 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.73□□□□□ -0.05
Rpp40Q8R1F9 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rpp40Q8R1F9 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Rpp40Q8R1F9 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rpp40Q8R1F9 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rpp40Q8R1F9 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rpp40Q8R1F9 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rpp40Q8R1F9 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rpp40Q8R1F9 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rpp40Q8R1F9 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Rpp40Q8R1F9 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rpp40Q8R1F9 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rpp40Q8R1F9 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.73□□□□□ -0.05
Rpp40Q8R1F9 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rpp40Q8R1F9 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.73□□□□□ -0.05
Rpp40Q8R1F9 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Rpp40Q8R1F9 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rpp40Q8R1F9 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rpp40Q8R1F9 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rpp40Q8R1F9 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rpp40Q8R1F9 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rpp40Q8R1F9 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Rpp40Q8R1F9 Gm15770-201ENSMUST00000117498 584 ntBASIC14.72□□□□□ -0.05
Rpp40Q8R1F9 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.72□□□□□ -0.05
Rpp40Q8R1F9 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.72□□□□□ -0.05
Rpp40Q8R1F9 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.72□□□□□ -0.05
Rpp40Q8R1F9 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rpp40Q8R1F9 Gm44719-201ENSMUST00000206404 149 ntBASIC14.72□□□□□ -0.05
Rpp40Q8R1F9 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.72□□□□□ -0.05
Rpp40Q8R1F9 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Rpp40Q8R1F9 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Rpp40Q8R1F9 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rpp40Q8R1F9 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rpp40Q8R1F9 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rpp40Q8R1F9 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.72□□□□□ -0.05
Rpp40Q8R1F9 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.72□□□□□ -0.05
Rpp40Q8R1F9 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Rpp40Q8R1F9 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rpp40Q8R1F9 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rpp40Q8R1F9 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rpp40Q8R1F9 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Rpp40Q8R1F9 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rpp40Q8R1F9 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rpp40Q8R1F9 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rpp40Q8R1F9 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rpp40Q8R1F9 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rpp40Q8R1F9 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rpp40Q8R1F9 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rpp40Q8R1F9 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rpp40Q8R1F9 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rpp40Q8R1F9 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rpp40Q8R1F9 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Rpp40Q8R1F9 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rpp40Q8R1F9 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Rpp40Q8R1F9 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Rpp40Q8R1F9 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.71□□□□□ -0.05
Rpp40Q8R1F9 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Rpp40Q8R1F9 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rpp40Q8R1F9 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC14.71□□□□□ -0.05
Rpp40Q8R1F9 Gm13689-201ENSMUST00000119360 685 ntBASIC14.71□□□□□ -0.05
Rpp40Q8R1F9 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rpp40Q8R1F9 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rpp40Q8R1F9 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.71□□□□□ -0.05
Rpp40Q8R1F9 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rpp40Q8R1F9 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rpp40Q8R1F9 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Rpp40Q8R1F9 Gm5161-201ENSMUST00000075243 853 ntBASIC14.71□□□□□ -0.05
Rpp40Q8R1F9 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Rpp40Q8R1F9 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rpp40Q8R1F9 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Rpp40Q8R1F9 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rpp40Q8R1F9 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rpp40Q8R1F9 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Rpp40Q8R1F9 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rpp40Q8R1F9 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rpp40Q8R1F9 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Rpp40Q8R1F9 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Rpp40Q8R1F9 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.06
Rpp40Q8R1F9 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rpp40Q8R1F9 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rpp40Q8R1F9 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms