Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shtn1Q8K2Q9 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Shtn1Q8K2Q9 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC16.19■□□□□ 0.18
Shtn1Q8K2Q9 Gm4271-201ENSMUST00000174444 973 ntBASIC16.19■□□□□ 0.18
Shtn1Q8K2Q9 Gm29608-201ENSMUST00000190444 463 ntBASIC16.19■□□□□ 0.18
Shtn1Q8K2Q9 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC16.19■□□□□ 0.18
Shtn1Q8K2Q9 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Shtn1Q8K2Q9 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shtn1Q8K2Q9 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shtn1Q8K2Q9 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shtn1Q8K2Q9 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shtn1Q8K2Q9 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shtn1Q8K2Q9 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shtn1Q8K2Q9 Ssr1-204ENSMUST00000225319 1610 ntBASIC16.19■□□□□ 0.18
Shtn1Q8K2Q9 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Shtn1Q8K2Q9 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC16.19■□□□□ 0.18
Shtn1Q8K2Q9 Gm14451-201ENSMUST00000121581 1542 ntBASIC16.19■□□□□ 0.18
Shtn1Q8K2Q9 Gm13859-201ENSMUST00000119936 1423 ntBASIC16.19■□□□□ 0.18
Shtn1Q8K2Q9 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shtn1Q8K2Q9 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Shtn1Q8K2Q9 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shtn1Q8K2Q9 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shtn1Q8K2Q9 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shtn1Q8K2Q9 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shtn1Q8K2Q9 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Shtn1Q8K2Q9 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shtn1Q8K2Q9 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shtn1Q8K2Q9 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Shtn1Q8K2Q9 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Shtn1Q8K2Q9 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shtn1Q8K2Q9 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Shtn1Q8K2Q9 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC16.18■□□□□ 0.18
Shtn1Q8K2Q9 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC16.18■□□□□ 0.18
Shtn1Q8K2Q9 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC16.18■□□□□ 0.18
Shtn1Q8K2Q9 Rn7s1-201ENSMUST00000174924 300 ntBASIC16.18■□□□□ 0.18
Shtn1Q8K2Q9 Rn7s2-201ENSMUST00000175032 300 ntBASIC16.18■□□□□ 0.18
Shtn1Q8K2Q9 Gm26461-201ENSMUST00000175064 290 ntBASIC16.18■□□□□ 0.18
Shtn1Q8K2Q9 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shtn1Q8K2Q9 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC16.18■□□□□ 0.18
Shtn1Q8K2Q9 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Shtn1Q8K2Q9 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC16.18■□□□□ 0.18
Shtn1Q8K2Q9 Gm3786-201ENSMUST00000202659 378 ntBASIC16.18■□□□□ 0.18
Shtn1Q8K2Q9 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Shtn1Q8K2Q9 AC134335.2-201ENSMUST00000227660 440 ntBASIC16.18■□□□□ 0.18
Shtn1Q8K2Q9 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shtn1Q8K2Q9 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC16.18■□□□□ 0.18
Shtn1Q8K2Q9 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Shtn1Q8K2Q9 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC16.18■□□□□ 0.18
Shtn1Q8K2Q9 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shtn1Q8K2Q9 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
Shtn1Q8K2Q9 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shtn1Q8K2Q9 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shtn1Q8K2Q9 AC121801.1-201ENSMUST00000225363 1899 ntBASIC16.18■□□□□ 0.18
Shtn1Q8K2Q9 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shtn1Q8K2Q9 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Shtn1Q8K2Q9 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC16.17■□□□□ 0.18
Shtn1Q8K2Q9 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Shtn1Q8K2Q9 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Shtn1Q8K2Q9 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Shtn1Q8K2Q9 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shtn1Q8K2Q9 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC16.17■□□□□ 0.18
Shtn1Q8K2Q9 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC16.17■□□□□ 0.18
Shtn1Q8K2Q9 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Shtn1Q8K2Q9 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
Shtn1Q8K2Q9 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Shtn1Q8K2Q9 Gm8213-201ENSMUST00000118191 441 ntBASIC16.17■□□□□ 0.18
Shtn1Q8K2Q9 Gm13369-201ENSMUST00000119442 987 ntBASIC16.17■□□□□ 0.18
Shtn1Q8K2Q9 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Shtn1Q8K2Q9 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Shtn1Q8K2Q9 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC16.17■□□□□ 0.18
Shtn1Q8K2Q9 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Shtn1Q8K2Q9 AC093022.1-201ENSMUST00000226949 1072 ntBASIC16.17■□□□□ 0.18
Shtn1Q8K2Q9 AC132317.1-201ENSMUST00000227227 962 ntBASIC16.17■□□□□ 0.18
Shtn1Q8K2Q9 Gm5161-201ENSMUST00000075243 853 ntBASIC16.17■□□□□ 0.18
Shtn1Q8K2Q9 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Shtn1Q8K2Q9 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shtn1Q8K2Q9 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shtn1Q8K2Q9 AC168058.1-201ENSMUST00000219521 2282 ntBASIC16.17■□□□□ 0.18
Shtn1Q8K2Q9 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shtn1Q8K2Q9 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shtn1Q8K2Q9 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shtn1Q8K2Q9 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Shtn1Q8K2Q9 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Shtn1Q8K2Q9 Gm37912-201ENSMUST00000191895 3076 ntBASIC16.17■□□□□ 0.18
Shtn1Q8K2Q9 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Shtn1Q8K2Q9 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shtn1Q8K2Q9 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shtn1Q8K2Q9 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC16.17■□□□□ 0.18
Shtn1Q8K2Q9 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shtn1Q8K2Q9 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC16.16■□□□□ 0.18
Shtn1Q8K2Q9 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shtn1Q8K2Q9 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shtn1Q8K2Q9 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shtn1Q8K2Q9 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
Shtn1Q8K2Q9 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Shtn1Q8K2Q9 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shtn1Q8K2Q9 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shtn1Q8K2Q9 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shtn1Q8K2Q9 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Shtn1Q8K2Q9 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms