Protein–RNA interactions for Protein: Q8C3X2

Ccdc90b, Coiled-coil domain-containing protein 90B, mitochondrial, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc90bQ8C3X2 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc90bQ8C3X2 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Ccdc90bQ8C3X2 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc90bQ8C3X2 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc90bQ8C3X2 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc90bQ8C3X2 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc90bQ8C3X2 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc90bQ8C3X2 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc90bQ8C3X2 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Ccdc90bQ8C3X2 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc90bQ8C3X2 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc90bQ8C3X2 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc90bQ8C3X2 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Ccdc90bQ8C3X2 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc90bQ8C3X2 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc90bQ8C3X2 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC13.33□□□□□ -0.28
Ccdc90bQ8C3X2 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc90bQ8C3X2 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.33□□□□□ -0.28
Ccdc90bQ8C3X2 Gm2445-201ENSMUST00000182798 989 ntBASIC13.33□□□□□ -0.28
Ccdc90bQ8C3X2 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.33□□□□□ -0.28
Ccdc90bQ8C3X2 Umpk-ps-201ENSMUST00000211897 827 ntBASIC13.33□□□□□ -0.28
Ccdc90bQ8C3X2 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.33□□□□□ -0.28
Ccdc90bQ8C3X2 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc90bQ8C3X2 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc90bQ8C3X2 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc90bQ8C3X2 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc90bQ8C3X2 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Ccdc90bQ8C3X2 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc90bQ8C3X2 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc90bQ8C3X2 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Ccdc90bQ8C3X2 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.33□□□□□ -0.28
Ccdc90bQ8C3X2 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc90bQ8C3X2 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.33□□□□□ -0.28
Ccdc90bQ8C3X2 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc90bQ8C3X2 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc90bQ8C3X2 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc90bQ8C3X2 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc90bQ8C3X2 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc90bQ8C3X2 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Ccdc90bQ8C3X2 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc90bQ8C3X2 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc90bQ8C3X2 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc90bQ8C3X2 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.32□□□□□ -0.28
Ccdc90bQ8C3X2 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc90bQ8C3X2 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ccdc90bQ8C3X2 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.32□□□□□ -0.28
Ccdc90bQ8C3X2 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc90bQ8C3X2 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc90bQ8C3X2 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc90bQ8C3X2 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.32□□□□□ -0.28
Ccdc90bQ8C3X2 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.32□□□□□ -0.28
Ccdc90bQ8C3X2 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC13.32□□□□□ -0.28
Ccdc90bQ8C3X2 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc90bQ8C3X2 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Ccdc90bQ8C3X2 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Ccdc90bQ8C3X2 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc90bQ8C3X2 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc90bQ8C3X2 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc90bQ8C3X2 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc90bQ8C3X2 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc90bQ8C3X2 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc90bQ8C3X2 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc90bQ8C3X2 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc90bQ8C3X2 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Ccdc90bQ8C3X2 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc90bQ8C3X2 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Ccdc90bQ8C3X2 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc90bQ8C3X2 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc90bQ8C3X2 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Ccdc90bQ8C3X2 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc90bQ8C3X2 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc90bQ8C3X2 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc90bQ8C3X2 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc90bQ8C3X2 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc90bQ8C3X2 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc90bQ8C3X2 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc90bQ8C3X2 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc90bQ8C3X2 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc90bQ8C3X2 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc90bQ8C3X2 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc90bQ8C3X2 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.31□□□□□ -0.28
Ccdc90bQ8C3X2 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.31□□□□□ -0.28
Ccdc90bQ8C3X2 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.31□□□□□ -0.28
Ccdc90bQ8C3X2 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc90bQ8C3X2 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.31□□□□□ -0.28
Ccdc90bQ8C3X2 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc90bQ8C3X2 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc90bQ8C3X2 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc90bQ8C3X2 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc90bQ8C3X2 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc90bQ8C3X2 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc90bQ8C3X2 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc90bQ8C3X2 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.31□□□□□ -0.28
Ccdc90bQ8C3X2 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc90bQ8C3X2 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Ccdc90bQ8C3X2 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.3□□□□□ -0.28
Ccdc90bQ8C3X2 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc90bQ8C3X2 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc90bQ8C3X2 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ccdc90bQ8C3X2 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms