Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ube3dQ8BX13 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ube3dQ8BX13 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.27□□□□□ -0.45
Ube3dQ8BX13 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ube3dQ8BX13 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ube3dQ8BX13 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Ube3dQ8BX13 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ube3dQ8BX13 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ube3dQ8BX13 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ube3dQ8BX13 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Ube3dQ8BX13 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ube3dQ8BX13 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ube3dQ8BX13 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ube3dQ8BX13 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ube3dQ8BX13 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ube3dQ8BX13 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ube3dQ8BX13 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ube3dQ8BX13 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ube3dQ8BX13 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ube3dQ8BX13 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ube3dQ8BX13 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ube3dQ8BX13 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ube3dQ8BX13 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ube3dQ8BX13 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Ube3dQ8BX13 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ube3dQ8BX13 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ube3dQ8BX13 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ube3dQ8BX13 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.27□□□□□ -0.45
Ube3dQ8BX13 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.26□□□□□ -0.45
Ube3dQ8BX13 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ube3dQ8BX13 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Ube3dQ8BX13 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Ube3dQ8BX13 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ube3dQ8BX13 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ube3dQ8BX13 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.26□□□□□ -0.45
Ube3dQ8BX13 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ube3dQ8BX13 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Ube3dQ8BX13 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ube3dQ8BX13 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ube3dQ8BX13 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ube3dQ8BX13 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ube3dQ8BX13 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ube3dQ8BX13 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ube3dQ8BX13 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ube3dQ8BX13 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ube3dQ8BX13 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ube3dQ8BX13 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ube3dQ8BX13 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ube3dQ8BX13 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Ube3dQ8BX13 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ube3dQ8BX13 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ube3dQ8BX13 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.26□□□□□ -0.45
Ube3dQ8BX13 Gm14719-201ENSMUST00000121891 340 ntBASIC12.26□□□□□ -0.45
Ube3dQ8BX13 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Ube3dQ8BX13 Gm10275-202ENSMUST00000168697 495 ntBASIC12.26□□□□□ -0.45
Ube3dQ8BX13 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ube3dQ8BX13 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.26□□□□□ -0.45
Ube3dQ8BX13 Gm42790-201ENSMUST00000201268 969 ntBASIC12.26□□□□□ -0.45
Ube3dQ8BX13 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.26□□□□□ -0.45
Ube3dQ8BX13 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ube3dQ8BX13 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ube3dQ8BX13 Gm10275-201ENSMUST00000092620 635 ntBASIC12.26□□□□□ -0.45
Ube3dQ8BX13 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ube3dQ8BX13 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ube3dQ8BX13 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ube3dQ8BX13 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ube3dQ8BX13 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ube3dQ8BX13 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Ube3dQ8BX13 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ube3dQ8BX13 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ube3dQ8BX13 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Ube3dQ8BX13 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ube3dQ8BX13 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Ube3dQ8BX13 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ube3dQ8BX13 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ube3dQ8BX13 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ube3dQ8BX13 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ube3dQ8BX13 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ube3dQ8BX13 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ube3dQ8BX13 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ube3dQ8BX13 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Ube3dQ8BX13 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ube3dQ8BX13 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ube3dQ8BX13 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ube3dQ8BX13 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ube3dQ8BX13 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ube3dQ8BX13 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ube3dQ8BX13 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Ube3dQ8BX13 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.25□□□□□ -0.45
Ube3dQ8BX13 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ube3dQ8BX13 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ube3dQ8BX13 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ube3dQ8BX13 Gm27838-201ENSMUST00000184829 128 ntBASIC12.25□□□□□ -0.45
Ube3dQ8BX13 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Ube3dQ8BX13 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC12.25□□□□□ -0.45
Ube3dQ8BX13 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.25□□□□□ -0.45
Ube3dQ8BX13 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.25□□□□□ -0.45
Ube3dQ8BX13 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ube3dQ8BX13 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ube3dQ8BX13 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms