Protein–RNA interactions for Protein: Q7M732

Rtl1, Retrotransposon-like protein 1, mousemouse

Predictions only

Length 1,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl1Q7M732 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Rtl1Q7M732 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC24.21■■□□□ 1.47
Rtl1Q7M732 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC24.2■■□□□ 1.47
Rtl1Q7M732 Gm5620-201ENSMUST00000077991 1348 ntBASIC24.2■■□□□ 1.47
Rtl1Q7M732 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
Rtl1Q7M732 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Rtl1Q7M732 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
Rtl1Q7M732 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Rtl1Q7M732 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Rtl1Q7M732 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Rtl1Q7M732 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Rtl1Q7M732 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC24.2■■□□□ 1.46
Rtl1Q7M732 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC24.2■■□□□ 1.46
Rtl1Q7M732 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Rtl1Q7M732 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC24.2■■□□□ 1.46
Rtl1Q7M732 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC24.2■■□□□ 1.46
Rtl1Q7M732 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC24.2■■□□□ 1.46
Rtl1Q7M732 Gm5639-201ENSMUST00000122305 2403 ntBASIC24.2■■□□□ 1.46
Rtl1Q7M732 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Rtl1Q7M732 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Rtl1Q7M732 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC24.2■■□□□ 1.46
Rtl1Q7M732 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Rtl1Q7M732 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Rtl1Q7M732 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
Rtl1Q7M732 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Rtl1Q7M732 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Rtl1Q7M732 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Rtl1Q7M732 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Rtl1Q7M732 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Rtl1Q7M732 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
Rtl1Q7M732 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Rtl1Q7M732 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Rtl1Q7M732 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
Rtl1Q7M732 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Rtl1Q7M732 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Rtl1Q7M732 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Rtl1Q7M732 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rtl1Q7M732 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC24.18■■□□□ 1.46
Rtl1Q7M732 Gm10478-201ENSMUST00000084451 396 ntBASIC24.18■■□□□ 1.46
Rtl1Q7M732 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Rtl1Q7M732 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rtl1Q7M732 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Rtl1Q7M732 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rtl1Q7M732 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rtl1Q7M732 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
Rtl1Q7M732 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Rtl1Q7M732 Gm9728-201ENSMUST00000200197 1055 ntBASIC24.18■■□□□ 1.46
Rtl1Q7M732 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC24.18■■□□□ 1.46
Rtl1Q7M732 AC126253.1-201ENSMUST00000227974 824 ntBASIC24.18■■□□□ 1.46
Rtl1Q7M732 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rtl1Q7M732 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
Rtl1Q7M732 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rtl1Q7M732 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rtl1Q7M732 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rtl1Q7M732 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC24.17■■□□□ 1.46
Rtl1Q7M732 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Rtl1Q7M732 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC24.17■■□□□ 1.46
Rtl1Q7M732 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Rtl1Q7M732 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Rtl1Q7M732 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Rtl1Q7M732 Gm11400-201ENSMUST00000120853 1214 ntBASIC24.17■■□□□ 1.46
Rtl1Q7M732 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Rtl1Q7M732 Mir1982-201ENSMUST00000157368 74 ntBASIC24.17■■□□□ 1.46
Rtl1Q7M732 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Rtl1Q7M732 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC24.17■■□□□ 1.46
Rtl1Q7M732 Gm44291-201ENSMUST00000203102 2865 ntBASIC24.17■■□□□ 1.46
Rtl1Q7M732 Gm14608-201ENSMUST00000120030 1553 ntBASIC24.17■■□□□ 1.46
Rtl1Q7M732 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
Rtl1Q7M732 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Rtl1Q7M732 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
Rtl1Q7M732 Gm10339-203ENSMUST00000225409 1671 ntBASIC24.16■■□□□ 1.46
Rtl1Q7M732 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Rtl1Q7M732 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Rtl1Q7M732 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Rtl1Q7M732 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC24.16■■□□□ 1.46
Rtl1Q7M732 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC24.16■■□□□ 1.46
Rtl1Q7M732 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC24.16■■□□□ 1.46
Rtl1Q7M732 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Rtl1Q7M732 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Rtl1Q7M732 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Rtl1Q7M732 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
Rtl1Q7M732 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
Rtl1Q7M732 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC24.16■■□□□ 1.46
Rtl1Q7M732 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Rtl1Q7M732 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Rtl1Q7M732 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC24.16■■□□□ 1.46
Rtl1Q7M732 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
Rtl1Q7M732 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Rtl1Q7M732 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC24.15■■□□□ 1.46
Rtl1Q7M732 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC24.15■■□□□ 1.46
Rtl1Q7M732 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rtl1Q7M732 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Rtl1Q7M732 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC24.15■■□□□ 1.46
Rtl1Q7M732 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rtl1Q7M732 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC24.15■■□□□ 1.46
Rtl1Q7M732 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Rtl1Q7M732 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rtl1Q7M732 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rtl1Q7M732 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rtl1Q7M732 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms