Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Vma21Q78T54 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vma21Q78T54 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vma21Q78T54 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vma21Q78T54 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Vma21Q78T54 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Vma21Q78T54 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Vma21Q78T54 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vma21Q78T54 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vma21Q78T54 Gm6018-201ENSMUST00000216090 1306 ntBASIC11.21□□□□□ -0.61
Vma21Q78T54 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vma21Q78T54 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vma21Q78T54 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC11.21□□□□□ -0.61
Vma21Q78T54 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Vma21Q78T54 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Vma21Q78T54 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vma21Q78T54 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC11.21□□□□□ -0.61
Vma21Q78T54 Gm8116-201ENSMUST00000182917 1201 ntBASIC11.21□□□□□ -0.61
Vma21Q78T54 Gm44719-201ENSMUST00000206404 149 ntBASIC11.21□□□□□ -0.61
Vma21Q78T54 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC11.21□□□□□ -0.61
Vma21Q78T54 Gm45453-201ENSMUST00000211758 853 ntBASIC11.21□□□□□ -0.61
Vma21Q78T54 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC11.21□□□□□ -0.61
Vma21Q78T54 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Vma21Q78T54 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vma21Q78T54 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vma21Q78T54 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vma21Q78T54 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Vma21Q78T54 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Vma21Q78T54 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Vma21Q78T54 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Vma21Q78T54 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Vma21Q78T54 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Vma21Q78T54 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Vma21Q78T54 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Vma21Q78T54 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Vma21Q78T54 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Vma21Q78T54 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Vma21Q78T54 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.21□□□□□ -0.62
Vma21Q78T54 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Vma21Q78T54 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Vma21Q78T54 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC11.21□□□□□ -0.62
Vma21Q78T54 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Vma21Q78T54 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Vma21Q78T54 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Vma21Q78T54 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Vma21Q78T54 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Vma21Q78T54 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Vma21Q78T54 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.2□□□□□ -0.62
Vma21Q78T54 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Vma21Q78T54 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Vma21Q78T54 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Vma21Q78T54 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Vma21Q78T54 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Vma21Q78T54 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Vma21Q78T54 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Vma21Q78T54 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Vma21Q78T54 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Vma21Q78T54 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Vma21Q78T54 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Vma21Q78T54 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC11.2□□□□□ -0.62
Vma21Q78T54 Gm14494-201ENSMUST00000118786 435 ntBASIC11.2□□□□□ -0.62
Vma21Q78T54 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Vma21Q78T54 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC11.2□□□□□ -0.62
Vma21Q78T54 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Vma21Q78T54 Gm25925-201ENSMUST00000158314 306 ntBASIC11.2□□□□□ -0.62
Vma21Q78T54 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC11.2□□□□□ -0.62
Vma21Q78T54 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC11.2□□□□□ -0.62
Vma21Q78T54 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Vma21Q78T54 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Vma21Q78T54 AC154595.3-201ENSMUST00000224579 384 ntBASIC11.2□□□□□ -0.62
Vma21Q78T54 AC149588.3-201ENSMUST00000227515 150 ntBASIC11.2□□□□□ -0.62
Vma21Q78T54 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Vma21Q78T54 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Vma21Q78T54 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Vma21Q78T54 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Vma21Q78T54 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Vma21Q78T54 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Vma21Q78T54 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Vma21Q78T54 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Vma21Q78T54 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC11.2□□□□□ -0.62
Vma21Q78T54 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.2□□□□□ -0.62
Vma21Q78T54 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Vma21Q78T54 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC11.2□□□□□ -0.62
Vma21Q78T54 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.2□□□□□ -0.62
Vma21Q78T54 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Vma21Q78T54 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Vma21Q78T54 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.19□□□□□ -0.62
Vma21Q78T54 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Vma21Q78T54 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Vma21Q78T54 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC11.19□□□□□ -0.62
Vma21Q78T54 Gm44065-201ENSMUST00000203184 3527 ntBASIC11.19□□□□□ -0.62
Vma21Q78T54 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Vma21Q78T54 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC11.19□□□□□ -0.62
Vma21Q78T54 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Vma21Q78T54 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Vma21Q78T54 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Vma21Q78T54 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
Vma21Q78T54 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Vma21Q78T54 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Vma21Q78T54 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms