Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Six4Q61321 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.89□□□□□ -0.19
Six4Q61321 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.89□□□□□ -0.19
Six4Q61321 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Six4Q61321 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Six4Q61321 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Six4Q61321 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Six4Q61321 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Six4Q61321 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Six4Q61321 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Six4Q61321 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Six4Q61321 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Six4Q61321 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Six4Q61321 Gm15376-201ENSMUST00000122258 783 ntBASIC13.89□□□□□ -0.19
Six4Q61321 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Six4Q61321 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Six4Q61321 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.89□□□□□ -0.19
Six4Q61321 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Six4Q61321 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Six4Q61321 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Six4Q61321 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Six4Q61321 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Six4Q61321 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Six4Q61321 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.89□□□□□ -0.19
Six4Q61321 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Six4Q61321 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Six4Q61321 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Six4Q61321 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Six4Q61321 Matn2-206ENSMUST00000228570 2798 ntBASIC13.88□□□□□ -0.19
Six4Q61321 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Six4Q61321 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Six4Q61321 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Six4Q61321 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Six4Q61321 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Six4Q61321 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Six4Q61321 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Six4Q61321 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Six4Q61321 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Six4Q61321 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Six4Q61321 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Six4Q61321 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Six4Q61321 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Six4Q61321 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Six4Q61321 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Six4Q61321 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Six4Q61321 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Six4Q61321 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.88□□□□□ -0.19
Six4Q61321 Gm12859-201ENSMUST00000117834 427 ntBASIC13.88□□□□□ -0.19
Six4Q61321 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.88□□□□□ -0.19
Six4Q61321 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Six4Q61321 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Six4Q61321 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Six4Q61321 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Six4Q61321 Gm43094-201ENSMUST00000196549 921 ntBASIC13.88□□□□□ -0.19
Six4Q61321 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Six4Q61321 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.88□□□□□ -0.19
Six4Q61321 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.88□□□□□ -0.19
Six4Q61321 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.88□□□□□ -0.19
Six4Q61321 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Six4Q61321 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Six4Q61321 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Six4Q61321 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Six4Q61321 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Six4Q61321 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Six4Q61321 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Six4Q61321 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Six4Q61321 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Six4Q61321 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Six4Q61321 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.88□□□□□ -0.19
Six4Q61321 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Six4Q61321 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Six4Q61321 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
Six4Q61321 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Six4Q61321 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Six4Q61321 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.88□□□□□ -0.19
Six4Q61321 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Six4Q61321 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Six4Q61321 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Six4Q61321 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Six4Q61321 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Six4Q61321 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Six4Q61321 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Six4Q61321 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Six4Q61321 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Six4Q61321 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Six4Q61321 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Six4Q61321 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Six4Q61321 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Six4Q61321 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Six4Q61321 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Six4Q61321 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Six4Q61321 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Six4Q61321 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.87□□□□□ -0.19
Six4Q61321 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Six4Q61321 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.87□□□□□ -0.19
Six4Q61321 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
Six4Q61321 Gm27772-201ENSMUST00000184900 187 ntBASIC13.87□□□□□ -0.19
Six4Q61321 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.87□□□□□ -0.19
Six4Q61321 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.87□□□□□ -0.19
Six4Q61321 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms