Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ripk1Q60855 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ripk1Q60855 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ripk1Q60855 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Ripk1Q60855 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ripk1Q60855 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.02□□□□□ -0.33
Ripk1Q60855 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Ripk1Q60855 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ripk1Q60855 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ripk1Q60855 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ripk1Q60855 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ripk1Q60855 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ripk1Q60855 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ripk1Q60855 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ripk1Q60855 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ripk1Q60855 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Ripk1Q60855 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ripk1Q60855 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ripk1Q60855 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ripk1Q60855 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ripk1Q60855 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ripk1Q60855 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ripk1Q60855 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ripk1Q60855 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ripk1Q60855 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ripk1Q60855 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ripk1Q60855 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ripk1Q60855 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ripk1Q60855 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ripk1Q60855 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ripk1Q60855 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Ripk1Q60855 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.01□□□□□ -0.33
Ripk1Q60855 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.01□□□□□ -0.33
Ripk1Q60855 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.01□□□□□ -0.33
Ripk1Q60855 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.01□□□□□ -0.33
Ripk1Q60855 Gm13616-201ENSMUST00000120600 222 ntBASIC13.01□□□□□ -0.33
Ripk1Q60855 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ripk1Q60855 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ripk1Q60855 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ripk1Q60855 Gm27618-201ENSMUST00000183671 60 ntBASIC13.01□□□□□ -0.33
Ripk1Q60855 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.01□□□□□ -0.33
Ripk1Q60855 Gm29741-201ENSMUST00000192667 421 ntBASIC13.01□□□□□ -0.33
Ripk1Q60855 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.01□□□□□ -0.33
Ripk1Q60855 Gm46209-201ENSMUST00000217912 553 ntBASIC13.01□□□□□ -0.33
Ripk1Q60855 Gm9229-201ENSMUST00000222777 126 ntBASIC13.01□□□□□ -0.33
Ripk1Q60855 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ripk1Q60855 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.01□□□□□ -0.33
Ripk1Q60855 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.01□□□□□ -0.33
Ripk1Q60855 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ripk1Q60855 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ripk1Q60855 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Ripk1Q60855 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Ripk1Q60855 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.01□□□□□ -0.33
Ripk1Q60855 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ripk1Q60855 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ripk1Q60855 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ripk1Q60855 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
Ripk1Q60855 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ripk1Q60855 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ripk1Q60855 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ripk1Q60855 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ripk1Q60855 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ripk1Q60855 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Ripk1Q60855 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ripk1Q60855 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13□□□□□ -0.33
Ripk1Q60855 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ripk1Q60855 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ripk1Q60855 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ripk1Q60855 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ripk1Q60855 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ripk1Q60855 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13□□□□□ -0.33
Ripk1Q60855 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13□□□□□ -0.33
Ripk1Q60855 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ripk1Q60855 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ripk1Q60855 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Ripk1Q60855 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ripk1Q60855 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Ripk1Q60855 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13□□□□□ -0.33
Ripk1Q60855 Gm15460-201ENSMUST00000118147 391 ntBASIC13□□□□□ -0.33
Ripk1Q60855 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Ripk1Q60855 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ripk1Q60855 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13□□□□□ -0.33
Ripk1Q60855 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ripk1Q60855 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13□□□□□ -0.33
Ripk1Q60855 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13□□□□□ -0.33
Ripk1Q60855 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ripk1Q60855 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Ripk1Q60855 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13□□□□□ -0.33
Ripk1Q60855 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Ripk1Q60855 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ripk1Q60855 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ripk1Q60855 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ripk1Q60855 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ripk1Q60855 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ripk1Q60855 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ripk1Q60855 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ripk1Q60855 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13□□□□□ -0.33
Ripk1Q60855 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ripk1Q60855 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ripk1Q60855 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms