Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.29□□□□□ -0.12
Satb1Q60611 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Satb1Q60611 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Satb1Q60611 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Satb1Q60611 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Satb1Q60611 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Satb1Q60611 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Satb1Q60611 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.29□□□□□ -0.12
Satb1Q60611 Gm13350-201ENSMUST00000120519 479 ntBASIC14.29□□□□□ -0.12
Satb1Q60611 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Satb1Q60611 Gm8652-201ENSMUST00000181363 964 ntBASIC14.29□□□□□ -0.12
Satb1Q60611 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.29□□□□□ -0.12
Satb1Q60611 CU024892.2-201ENSMUST00000224608 832 ntBASIC14.29□□□□□ -0.12
Satb1Q60611 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Satb1Q60611 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Satb1Q60611 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Satb1Q60611 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Satb1Q60611 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Satb1Q60611 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Satb1Q60611 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Satb1Q60611 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Satb1Q60611 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.29□□□□□ -0.12
Satb1Q60611 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Satb1Q60611 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Satb1Q60611 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Satb1Q60611 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Satb1Q60611 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Satb1Q60611 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Satb1Q60611 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Satb1Q60611 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.28□□□□□ -0.12
Satb1Q60611 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Satb1Q60611 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Satb1Q60611 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Satb1Q60611 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Satb1Q60611 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Satb1Q60611 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Satb1Q60611 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Satb1Q60611 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Satb1Q60611 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Satb1Q60611 Gm7584-201ENSMUST00000175829 940 ntBASIC14.28□□□□□ -0.12
Satb1Q60611 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Satb1Q60611 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Satb1Q60611 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Satb1Q60611 Gm29649-201ENSMUST00000185649 419 ntBASIC14.28□□□□□ -0.12
Satb1Q60611 Gm29127-201ENSMUST00000188304 517 ntBASIC14.28□□□□□ -0.12
Satb1Q60611 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC14.28□□□□□ -0.12
Satb1Q60611 Gm43677-201ENSMUST00000198098 2378 ntBASIC14.28□□□□□ -0.12
Satb1Q60611 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Satb1Q60611 Gm18054-201ENSMUST00000207539 555 ntBASIC14.28□□□□□ -0.12
Satb1Q60611 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.28□□□□□ -0.12
Satb1Q60611 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Satb1Q60611 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Satb1Q60611 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Satb1Q60611 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Satb1Q60611 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Satb1Q60611 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Satb1Q60611 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Satb1Q60611 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Satb1Q60611 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Satb1Q60611 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Satb1Q60611 Gm43321-201ENSMUST00000198897 2409 ntBASIC14.27□□□□□ -0.12
Satb1Q60611 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Satb1Q60611 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Satb1Q60611 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Satb1Q60611 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Satb1Q60611 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Satb1Q60611 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.27□□□□□ -0.12
Satb1Q60611 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Satb1Q60611 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.27□□□□□ -0.12
Satb1Q60611 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Satb1Q60611 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Satb1Q60611 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Satb1Q60611 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Satb1Q60611 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Satb1Q60611 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Satb1Q60611 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Satb1Q60611 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Satb1Q60611 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Satb1Q60611 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.27□□□□□ -0.13
Satb1Q60611 Gm12134-201ENSMUST00000122109 520 ntBASIC14.27□□□□□ -0.13
Satb1Q60611 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Satb1Q60611 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Satb1Q60611 Gm33320-201ENSMUST00000192232 530 ntBASIC14.27□□□□□ -0.13
Satb1Q60611 Gm43068-201ENSMUST00000201095 1273 ntBASIC14.27□□□□□ -0.13
Satb1Q60611 Gm6916-202ENSMUST00000205523 195 ntBASIC14.27□□□□□ -0.13
Satb1Q60611 Mettl6-204ENSMUST00000227595 1027 ntBASIC14.27□□□□□ -0.13
Satb1Q60611 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Satb1Q60611 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Satb1Q60611 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Satb1Q60611 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.27□□□□□ -0.13
Satb1Q60611 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Satb1Q60611 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Satb1Q60611 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Satb1Q60611 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Satb1Q60611 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.27□□□□□ -0.13
Satb1Q60611 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Satb1Q60611 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Satb1Q60611 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Satb1Q60611 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Satb1Q60611 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms