Protein–RNA interactions for Protein: Q3V036

Ccdc27, Coiled-coil domain-containing protein 27, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27Q3V036 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc27Q3V036 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc27Q3V036 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc27Q3V036 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc27Q3V036 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc27Q3V036 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc27Q3V036 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Ccdc27Q3V036 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc27Q3V036 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc27Q3V036 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC17.57■□□□□ 0.4
Ccdc27Q3V036 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Ccdc27Q3V036 Gm13365-201ENSMUST00000121188 973 ntBASIC17.57■□□□□ 0.4
Ccdc27Q3V036 Gm25925-201ENSMUST00000158314 306 ntBASIC17.57■□□□□ 0.4
Ccdc27Q3V036 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Ccdc27Q3V036 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc27Q3V036 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Ccdc27Q3V036 AC124549.3-201ENSMUST00000225541 367 ntBASIC17.57■□□□□ 0.4
Ccdc27Q3V036 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc27Q3V036 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Ccdc27Q3V036 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc27Q3V036 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc27Q3V036 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Ccdc27Q3V036 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc27Q3V036 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc27Q3V036 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Ccdc27Q3V036 Pck2-205ENSMUST00000226352 2784 ntBASIC17.57■□□□□ 0.4
Ccdc27Q3V036 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc27Q3V036 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Ccdc27Q3V036 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc27Q3V036 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc27Q3V036 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc27Q3V036 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ccdc27Q3V036 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC17.56■□□□□ 0.4
Ccdc27Q3V036 Gm18889-201ENSMUST00000174284 929 ntBASIC17.56■□□□□ 0.4
Ccdc27Q3V036 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC17.56■□□□□ 0.4
Ccdc27Q3V036 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC17.56■□□□□ 0.4
Ccdc27Q3V036 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc27Q3V036 CT943659.1-201ENSMUST00000215459 326 ntBASIC17.56■□□□□ 0.4
Ccdc27Q3V036 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc27Q3V036 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ccdc27Q3V036 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc27Q3V036 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc27Q3V036 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc27Q3V036 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC17.56■□□□□ 0.4
Ccdc27Q3V036 Gm37795-201ENSMUST00000194216 2459 ntBASIC17.56■□□□□ 0.4
Ccdc27Q3V036 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc27Q3V036 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc27Q3V036 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Ccdc27Q3V036 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc27Q3V036 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc27Q3V036 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc27Q3V036 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Ccdc27Q3V036 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc27Q3V036 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc27Q3V036 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc27Q3V036 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC17.55■□□□□ 0.4
Ccdc27Q3V036 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ccdc27Q3V036 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc27Q3V036 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc27Q3V036 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc27Q3V036 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc27Q3V036 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ccdc27Q3V036 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc27Q3V036 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc27Q3V036 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc27Q3V036 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc27Q3V036 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc27Q3V036 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc27Q3V036 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc27Q3V036 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc27Q3V036 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc27Q3V036 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc27Q3V036 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc27Q3V036 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc27Q3V036 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC17.54■□□□□ 0.4
Ccdc27Q3V036 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc27Q3V036 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC17.54■□□□□ 0.4
Ccdc27Q3V036 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Ccdc27Q3V036 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Ccdc27Q3V036 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc27Q3V036 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc27Q3V036 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ccdc27Q3V036 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ccdc27Q3V036 Gm14822-201ENSMUST00000122247 291 ntBASIC17.54■□□□□ 0.4
Ccdc27Q3V036 Gm8584-201ENSMUST00000171982 758 ntBASIC17.54■□□□□ 0.4
Ccdc27Q3V036 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Ccdc27Q3V036 Gm29310-201ENSMUST00000185468 696 ntBASIC17.54■□□□□ 0.4
Ccdc27Q3V036 Gm21825-201ENSMUST00000185728 696 ntBASIC17.54■□□□□ 0.4
Ccdc27Q3V036 Gm29109-201ENSMUST00000185895 696 ntBASIC17.54■□□□□ 0.4
Ccdc27Q3V036 Gm21896-201ENSMUST00000186520 696 ntBASIC17.54■□□□□ 0.4
Ccdc27Q3V036 Gm21873-201ENSMUST00000186728 696 ntBASIC17.54■□□□□ 0.4
Ccdc27Q3V036 Gm21794-201ENSMUST00000187056 696 ntBASIC17.54■□□□□ 0.4
Ccdc27Q3V036 Gm21880-201ENSMUST00000187275 696 ntBASIC17.54■□□□□ 0.4
Ccdc27Q3V036 Gm21826-201ENSMUST00000187451 696 ntBASIC17.54■□□□□ 0.4
Ccdc27Q3V036 Gm21198-201ENSMUST00000188393 696 ntBASIC17.54■□□□□ 0.4
Ccdc27Q3V036 Gm21749-201ENSMUST00000189343 696 ntBASIC17.54■□□□□ 0.4
Ccdc27Q3V036 Gm21901-201ENSMUST00000189568 696 ntBASIC17.54■□□□□ 0.4
Ccdc27Q3V036 Gm29424-201ENSMUST00000189716 696 ntBASIC17.54■□□□□ 0.4
Ccdc27Q3V036 Gm28599-201ENSMUST00000189838 694 ntBASIC17.54■□□□□ 0.4
Ccdc27Q3V036 Gm21867-201ENSMUST00000189917 696 ntBASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms