Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.99□□□□□ -0.33
Brf2Q3UAW9 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.99□□□□□ -0.33
Brf2Q3UAW9 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Brf2Q3UAW9 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Brf2Q3UAW9 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Brf2Q3UAW9 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Brf2Q3UAW9 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Brf2Q3UAW9 Mir497b-201ENSMUST00000093601 125 ntBASIC12.99□□□□□ -0.33
Brf2Q3UAW9 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Brf2Q3UAW9 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Brf2Q3UAW9 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Brf2Q3UAW9 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Brf2Q3UAW9 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.99□□□□□ -0.33
Brf2Q3UAW9 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Brf2Q3UAW9 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Brf2Q3UAW9 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Brf2Q3UAW9 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Brf2Q3UAW9 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Brf2Q3UAW9 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Brf2Q3UAW9 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Brf2Q3UAW9 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Brf2Q3UAW9 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Brf2Q3UAW9 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Brf2Q3UAW9 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Brf2Q3UAW9 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Brf2Q3UAW9 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Brf2Q3UAW9 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Brf2Q3UAW9 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Brf2Q3UAW9 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Brf2Q3UAW9 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Brf2Q3UAW9 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Brf2Q3UAW9 Mir698-201ENSMUST00000102164 109 ntBASIC12.98□□□□□ -0.33
Brf2Q3UAW9 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Brf2Q3UAW9 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.98□□□□□ -0.33
Brf2Q3UAW9 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Brf2Q3UAW9 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.98□□□□□ -0.33
Brf2Q3UAW9 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Brf2Q3UAW9 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Brf2Q3UAW9 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.98□□□□□ -0.33
Brf2Q3UAW9 Gm6888-201ENSMUST00000221983 706 ntBASIC12.98□□□□□ -0.33
Brf2Q3UAW9 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Brf2Q3UAW9 Acot6-202ENSMUST00000222921 3622 ntBASIC12.98□□□□□ -0.33
Brf2Q3UAW9 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Brf2Q3UAW9 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Brf2Q3UAW9 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Brf2Q3UAW9 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Brf2Q3UAW9 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Brf2Q3UAW9 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.98□□□□□ -0.33
Brf2Q3UAW9 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Brf2Q3UAW9 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.98□□□□□ -0.33
Brf2Q3UAW9 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Brf2Q3UAW9 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Brf2Q3UAW9 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Brf2Q3UAW9 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Brf2Q3UAW9 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Brf2Q3UAW9 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Brf2Q3UAW9 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Brf2Q3UAW9 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Brf2Q3UAW9 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Brf2Q3UAW9 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Brf2Q3UAW9 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Brf2Q3UAW9 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Brf2Q3UAW9 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Brf2Q3UAW9 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Brf2Q3UAW9 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Brf2Q3UAW9 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Brf2Q3UAW9 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Brf2Q3UAW9 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Brf2Q3UAW9 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Brf2Q3UAW9 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Brf2Q3UAW9 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Brf2Q3UAW9 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.97□□□□□ -0.33
Brf2Q3UAW9 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.97□□□□□ -0.33
Brf2Q3UAW9 Gm13616-201ENSMUST00000120600 222 ntBASIC12.97□□□□□ -0.33
Brf2Q3UAW9 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Brf2Q3UAW9 Gm3436-201ENSMUST00000179930 840 ntBASIC12.97□□□□□ -0.33
Brf2Q3UAW9 Gm4804-201ENSMUST00000182234 999 ntBASIC12.97□□□□□ -0.33
Brf2Q3UAW9 Gm27618-201ENSMUST00000183671 60 ntBASIC12.97□□□□□ -0.33
Brf2Q3UAW9 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Brf2Q3UAW9 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Brf2Q3UAW9 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Brf2Q3UAW9 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Brf2Q3UAW9 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Brf2Q3UAW9 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Brf2Q3UAW9 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Brf2Q3UAW9 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Brf2Q3UAW9 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Brf2Q3UAW9 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Brf2Q3UAW9 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Brf2Q3UAW9 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Brf2Q3UAW9 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Brf2Q3UAW9 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Brf2Q3UAW9 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Brf2Q3UAW9 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Brf2Q3UAW9 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Brf2Q3UAW9 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Brf2Q3UAW9 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Brf2Q3UAW9 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Brf2Q3UAW9 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Brf2Q3UAW9 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms