Protein–RNA interactions for Protein: Q3U1D0

Lins1, Protein Lines homolog 1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lins1Q3U1D0 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lins1Q3U1D0 AC131068.2-201ENSMUST00000226175 1453 ntBASIC16.35■□□□□ 0.21
Lins1Q3U1D0 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lins1Q3U1D0 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Lins1Q3U1D0 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lins1Q3U1D0 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lins1Q3U1D0 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lins1Q3U1D0 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
Lins1Q3U1D0 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lins1Q3U1D0 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lins1Q3U1D0 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lins1Q3U1D0 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.35■□□□□ 0.21
Lins1Q3U1D0 Gm11814-201ENSMUST00000119515 929 ntBASIC16.35■□□□□ 0.21
Lins1Q3U1D0 Gm12416-201ENSMUST00000120911 1008 ntBASIC16.35■□□□□ 0.21
Lins1Q3U1D0 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC16.35■□□□□ 0.21
Lins1Q3U1D0 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC16.35■□□□□ 0.21
Lins1Q3U1D0 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Lins1Q3U1D0 Mir1938-201ENSMUST00000158746 100 ntBASIC16.35■□□□□ 0.21
Lins1Q3U1D0 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lins1Q3U1D0 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lins1Q3U1D0 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lins1Q3U1D0 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lins1Q3U1D0 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC16.35■□□□□ 0.21
Lins1Q3U1D0 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lins1Q3U1D0 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Lins1Q3U1D0 Gm8775-201ENSMUST00000170943 1327 ntBASIC16.35■□□□□ 0.21
Lins1Q3U1D0 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC16.35■□□□□ 0.21
Lins1Q3U1D0 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Lins1Q3U1D0 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Lins1Q3U1D0 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lins1Q3U1D0 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lins1Q3U1D0 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Lins1Q3U1D0 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Lins1Q3U1D0 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lins1Q3U1D0 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC16.34■□□□□ 0.21
Lins1Q3U1D0 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lins1Q3U1D0 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Lins1Q3U1D0 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC16.34■□□□□ 0.21
Lins1Q3U1D0 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lins1Q3U1D0 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lins1Q3U1D0 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Lins1Q3U1D0 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC16.34■□□□□ 0.21
Lins1Q3U1D0 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC16.34■□□□□ 0.21
Lins1Q3U1D0 Gm8652-201ENSMUST00000181363 964 ntBASIC16.34■□□□□ 0.21
Lins1Q3U1D0 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC16.34■□□□□ 0.21
Lins1Q3U1D0 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Lins1Q3U1D0 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lins1Q3U1D0 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Lins1Q3U1D0 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC16.34■□□□□ 0.21
Lins1Q3U1D0 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lins1Q3U1D0 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lins1Q3U1D0 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC16.34■□□□□ 0.21
Lins1Q3U1D0 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lins1Q3U1D0 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Lins1Q3U1D0 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Lins1Q3U1D0 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Lins1Q3U1D0 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lins1Q3U1D0 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lins1Q3U1D0 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lins1Q3U1D0 Gm12485-201ENSMUST00000119641 291 ntBASIC16.33■□□□□ 0.2
Lins1Q3U1D0 Gm16342-201ENSMUST00000124025 1025 ntBASIC16.33■□□□□ 0.2
Lins1Q3U1D0 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lins1Q3U1D0 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC16.33■□□□□ 0.2
Lins1Q3U1D0 Gm4971-201ENSMUST00000205991 1108 ntBASIC16.33■□□□□ 0.2
Lins1Q3U1D0 Gm7561-201ENSMUST00000211203 886 ntBASIC16.33■□□□□ 0.2
Lins1Q3U1D0 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lins1Q3U1D0 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lins1Q3U1D0 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lins1Q3U1D0 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC16.33■□□□□ 0.2
Lins1Q3U1D0 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lins1Q3U1D0 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lins1Q3U1D0 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lins1Q3U1D0 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lins1Q3U1D0 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lins1Q3U1D0 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Lins1Q3U1D0 Gm42769-201ENSMUST00000198576 1659 ntBASIC16.33■□□□□ 0.2
Lins1Q3U1D0 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lins1Q3U1D0 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC16.33■□□□□ 0.2
Lins1Q3U1D0 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Lins1Q3U1D0 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Lins1Q3U1D0 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lins1Q3U1D0 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lins1Q3U1D0 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lins1Q3U1D0 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lins1Q3U1D0 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lins1Q3U1D0 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lins1Q3U1D0 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lins1Q3U1D0 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lins1Q3U1D0 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lins1Q3U1D0 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Lins1Q3U1D0 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
Lins1Q3U1D0 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lins1Q3U1D0 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC16.32■□□□□ 0.2
Lins1Q3U1D0 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lins1Q3U1D0 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lins1Q3U1D0 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lins1Q3U1D0 Gm5276-201ENSMUST00000196683 1047 ntBASIC16.32■□□□□ 0.2
Lins1Q3U1D0 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC16.32■□□□□ 0.2
Lins1Q3U1D0 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC16.32■□□□□ 0.2
Lins1Q3U1D0 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms