Protein–RNA interactions for Protein: Q3TJD7

Pdlim7, PDZ and LIM domain protein 7, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim7Q3TJD7 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pdlim7Q3TJD7 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Pdlim7Q3TJD7 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pdlim7Q3TJD7 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pdlim7Q3TJD7 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pdlim7Q3TJD7 Gm8584-201ENSMUST00000171982 758 ntBASIC15.35■□□□□ 0.05
Pdlim7Q3TJD7 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC15.35■□□□□ 0.05
Pdlim7Q3TJD7 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC15.35■□□□□ 0.05
Pdlim7Q3TJD7 Gm2383-201ENSMUST00000181461 807 ntBASIC15.35■□□□□ 0.05
Pdlim7Q3TJD7 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC15.35■□□□□ 0.05
Pdlim7Q3TJD7 Gm38158-201ENSMUST00000194617 339 ntBASIC15.35■□□□□ 0.05
Pdlim7Q3TJD7 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
Pdlim7Q3TJD7 Gm17870-201ENSMUST00000219489 1174 ntBASIC15.35■□□□□ 0.05
Pdlim7Q3TJD7 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pdlim7Q3TJD7 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Pdlim7Q3TJD7 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pdlim7Q3TJD7 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.35■□□□□ 0.05
Pdlim7Q3TJD7 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pdlim7Q3TJD7 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pdlim7Q3TJD7 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pdlim7Q3TJD7 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.34■□□□□ 0.05
Pdlim7Q3TJD7 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim7Q3TJD7 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim7Q3TJD7 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim7Q3TJD7 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC15.34■□□□□ 0.05
Pdlim7Q3TJD7 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Pdlim7Q3TJD7 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim7Q3TJD7 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim7Q3TJD7 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim7Q3TJD7 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim7Q3TJD7 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim7Q3TJD7 Gm15370-201ENSMUST00000117158 253 ntBASIC15.34■□□□□ 0.05
Pdlim7Q3TJD7 Gm14381-201ENSMUST00000122105 414 ntBASIC15.34■□□□□ 0.05
Pdlim7Q3TJD7 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC15.34■□□□□ 0.05
Pdlim7Q3TJD7 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC15.34■□□□□ 0.05
Pdlim7Q3TJD7 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC15.34■□□□□ 0.05
Pdlim7Q3TJD7 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim7Q3TJD7 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC15.34■□□□□ 0.05
Pdlim7Q3TJD7 Gm6082-201ENSMUST00000215204 454 ntBASIC15.34■□□□□ 0.05
Pdlim7Q3TJD7 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim7Q3TJD7 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim7Q3TJD7 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim7Q3TJD7 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.34■□□□□ 0.05
Pdlim7Q3TJD7 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim7Q3TJD7 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Pdlim7Q3TJD7 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim7Q3TJD7 AC153366.2-201ENSMUST00000219461 1984 ntBASIC15.34■□□□□ 0.05
Pdlim7Q3TJD7 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim7Q3TJD7 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC15.34■□□□□ 0.05
Pdlim7Q3TJD7 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Pdlim7Q3TJD7 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.34■□□□□ 0.05
Pdlim7Q3TJD7 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.34■□□□□ 0.05
Pdlim7Q3TJD7 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim7Q3TJD7 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim7Q3TJD7 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC15.34■□□□□ 0.05
Pdlim7Q3TJD7 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim7Q3TJD7 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Pdlim7Q3TJD7 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Pdlim7Q3TJD7 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pdlim7Q3TJD7 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Pdlim7Q3TJD7 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pdlim7Q3TJD7 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
Pdlim7Q3TJD7 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pdlim7Q3TJD7 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Pdlim7Q3TJD7 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pdlim7Q3TJD7 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pdlim7Q3TJD7 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Pdlim7Q3TJD7 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim7Q3TJD7 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim7Q3TJD7 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim7Q3TJD7 Gm12176-201ENSMUST00000121420 875 ntBASIC15.33■□□□□ 0.04
Pdlim7Q3TJD7 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim7Q3TJD7 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC15.33■□□□□ 0.04
Pdlim7Q3TJD7 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim7Q3TJD7 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim7Q3TJD7 Gm6222-202ENSMUST00000182143 629 ntBASIC15.33■□□□□ 0.04
Pdlim7Q3TJD7 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC15.33■□□□□ 0.04
Pdlim7Q3TJD7 AC132384.14-201ENSMUST00000219346 1147 ntBASIC15.33■□□□□ 0.04
Pdlim7Q3TJD7 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC15.33■□□□□ 0.04
Pdlim7Q3TJD7 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim7Q3TJD7 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim7Q3TJD7 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim7Q3TJD7 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.33■□□□□ 0.04
Pdlim7Q3TJD7 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim7Q3TJD7 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim7Q3TJD7 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim7Q3TJD7 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC15.33■□□□□ 0.04
Pdlim7Q3TJD7 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim7Q3TJD7 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Pdlim7Q3TJD7 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Pdlim7Q3TJD7 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim7Q3TJD7 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim7Q3TJD7 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim7Q3TJD7 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Pdlim7Q3TJD7 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim7Q3TJD7 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim7Q3TJD7 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pdlim7Q3TJD7 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pdlim7Q3TJD7 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pdlim7Q3TJD7 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms