Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Q3KNL4 Gm13015-201ENSMUST00000118674 204 ntBASIC13.54□□□□□ -0.24
Q3KNL4 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Q3KNL4 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.54□□□□□ -0.24
Q3KNL4 Gm2445-201ENSMUST00000182798 989 ntBASIC13.54□□□□□ -0.24
Q3KNL4 Gm27631-201ENSMUST00000184163 466 ntBASIC13.54□□□□□ -0.24
Q3KNL4 Gm43125-201ENSMUST00000201724 730 ntBASIC13.54□□□□□ -0.24
Q3KNL4 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.54□□□□□ -0.24
Q3KNL4 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.54□□□□□ -0.24
Q3KNL4 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Q3KNL4 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Q3KNL4 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Q3KNL4 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Q3KNL4 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Q3KNL4 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Q3KNL4 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Q3KNL4 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
Q3KNL4 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Q3KNL4 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Q3KNL4 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Q3KNL4 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Q3KNL4 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.53□□□□□ -0.24
Q3KNL4 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Q3KNL4 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Q3KNL4 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Q3KNL4 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Q3KNL4 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Q3KNL4 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Q3KNL4 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Q3KNL4 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Q3KNL4 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Q3KNL4 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Q3KNL4 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Q3KNL4 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Q3KNL4 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Q3KNL4 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Q3KNL4 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Q3KNL4 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Q3KNL4 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Q3KNL4 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Q3KNL4 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC13.53□□□□□ -0.24
Q3KNL4 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Q3KNL4 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.53□□□□□ -0.24
Q3KNL4 Mir6990-201ENSMUST00000183724 91 ntBASIC13.53□□□□□ -0.24
Q3KNL4 Gm18027-201ENSMUST00000218947 619 ntBASIC13.53□□□□□ -0.24
Q3KNL4 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.53□□□□□ -0.24
Q3KNL4 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Q3KNL4 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Q3KNL4 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Q3KNL4 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Q3KNL4 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Q3KNL4 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Q3KNL4 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Q3KNL4 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Q3KNL4 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Q3KNL4 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.53□□□□□ -0.24
Q3KNL4 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Q3KNL4 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Q3KNL4 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Q3KNL4 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Q3KNL4 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Q3KNL4 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.52□□□□□ -0.24
Q3KNL4 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Q3KNL4 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Q3KNL4 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Q3KNL4 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Q3KNL4 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Q3KNL4 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Q3KNL4 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Q3KNL4 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Q3KNL4 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Q3KNL4 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Q3KNL4 Gm25287-201ENSMUST00000103846 110 ntBASIC13.52□□□□□ -0.25
Q3KNL4 Gm22918-201ENSMUST00000103855 110 ntBASIC13.52□□□□□ -0.25
Q3KNL4 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.52□□□□□ -0.25
Q3KNL4 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.52□□□□□ -0.25
Q3KNL4 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Q3KNL4 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.52□□□□□ -0.25
Q3KNL4 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.52□□□□□ -0.25
Q3KNL4 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Q3KNL4 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Q3KNL4 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Q3KNL4 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Q3KNL4 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.52□□□□□ -0.25
Q3KNL4 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.52□□□□□ -0.25
Q3KNL4 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Q3KNL4 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.52□□□□□ -0.25
Q3KNL4 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Q3KNL4 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Q3KNL4 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Q3KNL4 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Q3KNL4 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Q3KNL4 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Q3KNL4 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Q3KNL4 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Q3KNL4 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
Q3KNL4 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Q3KNL4 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Q3KNL4 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Q3KNL4 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms