Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Ebf1Q07802 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.95□□□□□ -0.18
Ebf1Q07802 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Ebf1Q07802 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ebf1Q07802 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ebf1Q07802 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Ebf1Q07802 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ebf1Q07802 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ebf1Q07802 Gm11814-201ENSMUST00000119515 929 ntBASIC13.95□□□□□ -0.18
Ebf1Q07802 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Ebf1Q07802 Snora78-201ENSMUST00000158630 128 ntBASIC13.95□□□□□ -0.18
Ebf1Q07802 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.95□□□□□ -0.18
Ebf1Q07802 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.95□□□□□ -0.18
Ebf1Q07802 Gm8463-201ENSMUST00000208573 613 ntBASIC13.95□□□□□ -0.18
Ebf1Q07802 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ebf1Q07802 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.95□□□□□ -0.18
Ebf1Q07802 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ebf1Q07802 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.95□□□□□ -0.18
Ebf1Q07802 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.95□□□□□ -0.18
Ebf1Q07802 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.95□□□□□ -0.18
Ebf1Q07802 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ebf1Q07802 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.95□□□□□ -0.18
Ebf1Q07802 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ebf1Q07802 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ebf1Q07802 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ebf1Q07802 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ebf1Q07802 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ebf1Q07802 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.95□□□□□ -0.18
Ebf1Q07802 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ebf1Q07802 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Ebf1Q07802 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ebf1Q07802 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ebf1Q07802 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ebf1Q07802 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ebf1Q07802 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ebf1Q07802 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Ebf1Q07802 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ebf1Q07802 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ebf1Q07802 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ebf1Q07802 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ebf1Q07802 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ebf1Q07802 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.94□□□□□ -0.18
Ebf1Q07802 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.94□□□□□ -0.18
Ebf1Q07802 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
Ebf1Q07802 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ebf1Q07802 Gm45784-201ENSMUST00000188360 142 ntBASIC13.94□□□□□ -0.18
Ebf1Q07802 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Ebf1Q07802 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ebf1Q07802 Gm45331-201ENSMUST00000209868 554 ntBASIC13.94□□□□□ -0.18
Ebf1Q07802 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ebf1Q07802 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ebf1Q07802 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ebf1Q07802 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ebf1Q07802 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ebf1Q07802 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ebf1Q07802 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ebf1Q07802 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ebf1Q07802 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ebf1Q07802 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ebf1Q07802 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ebf1Q07802 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ebf1Q07802 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Ebf1Q07802 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ebf1Q07802 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf1Q07802 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf1Q07802 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf1Q07802 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf1Q07802 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf1Q07802 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf1Q07802 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf1Q07802 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf1Q07802 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf1Q07802 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf1Q07802 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf1Q07802 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf1Q07802 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Ebf1Q07802 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf1Q07802 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.93□□□□□ -0.18
Ebf1Q07802 Gm7287-201ENSMUST00000205267 602 ntBASIC13.93□□□□□ -0.18
Ebf1Q07802 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf1Q07802 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf1Q07802 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf1Q07802 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf1Q07802 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf1Q07802 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Ebf1Q07802 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf1Q07802 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf1Q07802 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf1Q07802 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf1Q07802 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Ebf1Q07802 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf1Q07802 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.93□□□□□ -0.18
Ebf1Q07802 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Ebf1Q07802 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf1Q07802 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Ebf1Q07802 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ebf1Q07802 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf1Q07802 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf1Q07802 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ebf1Q07802 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms