Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC20.66■□□□□ 0.9
Col17a1Q07563 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Col17a1Q07563 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col17a1Q07563 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC20.66■□□□□ 0.9
Col17a1Q07563 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC20.66■□□□□ 0.9
Col17a1Q07563 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Col17a1Q07563 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC20.66■□□□□ 0.9
Col17a1Q07563 Gm1821-202ENSMUST00000227415 750 ntBASIC20.66■□□□□ 0.9
Col17a1Q07563 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Col17a1Q07563 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col17a1Q07563 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col17a1Q07563 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Col17a1Q07563 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col17a1Q07563 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col17a1Q07563 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col17a1Q07563 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col17a1Q07563 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col17a1Q07563 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col17a1Q07563 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col17a1Q07563 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC20.65■□□□□ 0.9
Col17a1Q07563 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col17a1Q07563 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC20.65■□□□□ 0.9
Col17a1Q07563 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC20.65■□□□□ 0.9
Col17a1Q07563 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC20.65■□□□□ 0.9
Col17a1Q07563 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Col17a1Q07563 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col17a1Q07563 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col17a1Q07563 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Col17a1Q07563 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col17a1Q07563 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col17a1Q07563 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col17a1Q07563 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col17a1Q07563 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Col17a1Q07563 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Col17a1Q07563 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC20.64■□□□□ 0.9
Col17a1Q07563 AC121801.1-201ENSMUST00000225363 1899 ntBASIC20.64■□□□□ 0.9
Col17a1Q07563 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Col17a1Q07563 Gm12058-201ENSMUST00000118614 437 ntBASIC20.64■□□□□ 0.89
Col17a1Q07563 Gm15711-201ENSMUST00000118889 535 ntBASIC20.64■□□□□ 0.89
Col17a1Q07563 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC20.64■□□□□ 0.89
Col17a1Q07563 Mir7686-201ENSMUST00000200604 57 ntBASIC20.64■□□□□ 0.89
Col17a1Q07563 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col17a1Q07563 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col17a1Q07563 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col17a1Q07563 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col17a1Q07563 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col17a1Q07563 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col17a1Q07563 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Col17a1Q07563 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Col17a1Q07563 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Col17a1Q07563 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Col17a1Q07563 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col17a1Q07563 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col17a1Q07563 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col17a1Q07563 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC20.63■□□□□ 0.89
Col17a1Q07563 Gm12218-201ENSMUST00000117666 399 ntBASIC20.63■□□□□ 0.89
Col17a1Q07563 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Col17a1Q07563 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC20.63■□□□□ 0.89
Col17a1Q07563 Gm45120-201ENSMUST00000208880 408 ntBASIC20.63■□□□□ 0.89
Col17a1Q07563 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC20.63■□□□□ 0.89
Col17a1Q07563 Gm21027-201ENSMUST00000219300 1236 ntBASIC20.63■□□□□ 0.89
Col17a1Q07563 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col17a1Q07563 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC20.63■□□□□ 0.89
Col17a1Q07563 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col17a1Q07563 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Col17a1Q07563 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col17a1Q07563 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col17a1Q07563 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Col17a1Q07563 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col17a1Q07563 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col17a1Q07563 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Col17a1Q07563 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col17a1Q07563 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col17a1Q07563 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col17a1Q07563 Gm7851-201ENSMUST00000117574 323 ntBASIC20.62■□□□□ 0.89
Col17a1Q07563 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC20.62■□□□□ 0.89
Col17a1Q07563 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Col17a1Q07563 Ginm1-202ENSMUST00000065124 300 ntBASIC20.62■□□□□ 0.89
Col17a1Q07563 Gm20632-201ENSMUST00000176760 2427 ntBASIC20.62■□□□□ 0.89
Col17a1Q07563 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col17a1Q07563 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col17a1Q07563 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col17a1Q07563 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Col17a1Q07563 Prob1-201ENSMUST00000097619 3021 ntBASIC20.62■□□□□ 0.89
Col17a1Q07563 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Col17a1Q07563 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col17a1Q07563 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Col17a1Q07563 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Col17a1Q07563 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col17a1Q07563 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col17a1Q07563 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC20.62■□□□□ 0.89
Col17a1Q07563 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC20.62■□□□□ 0.89
Col17a1Q07563 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Col17a1Q07563 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Col17a1Q07563 Gm27627-201ENSMUST00000183644 150 ntBASIC20.62■□□□□ 0.89
Col17a1Q07563 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Col17a1Q07563 Gm18204-201ENSMUST00000209835 793 ntBASIC20.62■□□□□ 0.89
Col17a1Q07563 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC20.62■□□□□ 0.89
Col17a1Q07563 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col17a1Q07563 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms