Protein–RNA interactions for Protein: Q01149

Col1a2, Collagen alpha-2(I) chain, mousemouse

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a2Q01149 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col1a2Q01149 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col1a2Q01149 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC17.11■□□□□ 0.33
Col1a2Q01149 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col1a2Q01149 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC17.11■□□□□ 0.33
Col1a2Q01149 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col1a2Q01149 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Col1a2Q01149 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Col1a2Q01149 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col1a2Q01149 AC167013.2-201ENSMUST00000228520 2684 ntBASIC17.11■□□□□ 0.33
Col1a2Q01149 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col1a2Q01149 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Col1a2Q01149 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col1a2Q01149 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col1a2Q01149 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Col1a2Q01149 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col1a2Q01149 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col1a2Q01149 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col1a2Q01149 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col1a2Q01149 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col1a2Q01149 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC17.11■□□□□ 0.33
Col1a2Q01149 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC17.11■□□□□ 0.33
Col1a2Q01149 Gm12384-201ENSMUST00000119228 919 ntBASIC17.11■□□□□ 0.33
Col1a2Q01149 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Col1a2Q01149 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col1a2Q01149 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Col1a2Q01149 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col1a2Q01149 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC17.11■□□□□ 0.33
Col1a2Q01149 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col1a2Q01149 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Col1a2Q01149 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Col1a2Q01149 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC17.11■□□□□ 0.33
Col1a2Q01149 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC17.11■□□□□ 0.33
Col1a2Q01149 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col1a2Q01149 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col1a2Q01149 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col1a2Q01149 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col1a2Q01149 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col1a2Q01149 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col1a2Q01149 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Col1a2Q01149 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC17.1■□□□□ 0.33
Col1a2Q01149 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Col1a2Q01149 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col1a2Q01149 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC17.1■□□□□ 0.33
Col1a2Q01149 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Col1a2Q01149 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col1a2Q01149 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC17.1■□□□□ 0.33
Col1a2Q01149 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Col1a2Q01149 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Col1a2Q01149 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Col1a2Q01149 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col1a2Q01149 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Col1a2Q01149 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Col1a2Q01149 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Col1a2Q01149 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC17.1■□□□□ 0.33
Col1a2Q01149 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Col1a2Q01149 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Col1a2Q01149 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.1■□□□□ 0.33
Col1a2Q01149 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col1a2Q01149 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col1a2Q01149 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col1a2Q01149 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC17.09■□□□□ 0.33
Col1a2Q01149 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Col1a2Q01149 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC17.09■□□□□ 0.33
Col1a2Q01149 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Col1a2Q01149 Gm11618-201ENSMUST00000117946 267 ntBASIC17.09■□□□□ 0.33
Col1a2Q01149 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Col1a2Q01149 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC17.09■□□□□ 0.33
Col1a2Q01149 Gm37922-201ENSMUST00000195596 455 ntBASIC17.09■□□□□ 0.33
Col1a2Q01149 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
Col1a2Q01149 Gm45841-201ENSMUST00000207700 164 ntBASIC17.09■□□□□ 0.33
Col1a2Q01149 Gm6007-201ENSMUST00000208170 823 ntBASIC17.09■□□□□ 0.33
Col1a2Q01149 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC17.09■□□□□ 0.33
Col1a2Q01149 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col1a2Q01149 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col1a2Q01149 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col1a2Q01149 Gm10478-201ENSMUST00000084451 396 ntBASIC17.09■□□□□ 0.33
Col1a2Q01149 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col1a2Q01149 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col1a2Q01149 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Col1a2Q01149 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col1a2Q01149 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Col1a2Q01149 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC17.09■□□□□ 0.33
Col1a2Q01149 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col1a2Q01149 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Col1a2Q01149 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC17.08■□□□□ 0.33
Col1a2Q01149 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col1a2Q01149 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col1a2Q01149 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Col1a2Q01149 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col1a2Q01149 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col1a2Q01149 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col1a2Q01149 Gm8565-201ENSMUST00000183259 1014 ntBASIC17.08■□□□□ 0.32
Col1a2Q01149 Gm37497-201ENSMUST00000195830 798 ntBASIC17.08■□□□□ 0.32
Col1a2Q01149 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC17.08■□□□□ 0.32
Col1a2Q01149 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col1a2Q01149 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Col1a2Q01149 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col1a2Q01149 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Col1a2Q01149 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms