Protein–RNA interactions for Protein: P97390

Vps45, Vacuolar protein sorting-associated protein 45, mousemouse

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps45P97390 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vps45P97390 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.24□□□□□ -0.13
Vps45P97390 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps45P97390 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps45P97390 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps45P97390 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vps45P97390 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps45P97390 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps45P97390 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps45P97390 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.24□□□□□ -0.13
Vps45P97390 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vps45P97390 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps45P97390 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vps45P97390 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.24□□□□□ -0.13
Vps45P97390 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps45P97390 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps45P97390 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps45P97390 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Vps45P97390 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps45P97390 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps45P97390 Gm9002-201ENSMUST00000178437 499 ntBASIC14.24□□□□□ -0.13
Vps45P97390 Gm2445-201ENSMUST00000182798 989 ntBASIC14.24□□□□□ -0.13
Vps45P97390 Mir6420-201ENSMUST00000185032 102 ntBASIC14.24□□□□□ -0.13
Vps45P97390 Gm21470-201ENSMUST00000187680 696 ntBASIC14.24□□□□□ -0.13
Vps45P97390 AY702102-202ENSMUST00000194651 1173 ntBASIC14.24□□□□□ -0.13
Vps45P97390 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vps45P97390 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps45P97390 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.24□□□□□ -0.13
Vps45P97390 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Vps45P97390 Mir497b-201ENSMUST00000093601 125 ntBASIC14.24□□□□□ -0.13
Vps45P97390 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps45P97390 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps45P97390 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps45P97390 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps45P97390 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps45P97390 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps45P97390 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.24□□□□□ -0.13
Vps45P97390 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps45P97390 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps45P97390 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps45P97390 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Vps45P97390 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Vps45P97390 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps45P97390 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Vps45P97390 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps45P97390 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps45P97390 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vps45P97390 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps45P97390 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.23□□□□□ -0.13
Vps45P97390 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps45P97390 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Vps45P97390 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps45P97390 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vps45P97390 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps45P97390 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vps45P97390 Mir6392-201ENSMUST00000184924 108 ntBASIC14.23□□□□□ -0.13
Vps45P97390 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.23□□□□□ -0.13
Vps45P97390 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.23□□□□□ -0.13
Vps45P97390 Gm29741-201ENSMUST00000192667 421 ntBASIC14.23□□□□□ -0.13
Vps45P97390 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Vps45P97390 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC14.23□□□□□ -0.13
Vps45P97390 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.23□□□□□ -0.13
Vps45P97390 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.23□□□□□ -0.13
Vps45P97390 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps45P97390 Gm9797-201ENSMUST00000052902 613 ntBASIC14.23□□□□□ -0.13
Vps45P97390 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps45P97390 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps45P97390 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps45P97390 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps45P97390 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.23□□□□□ -0.13
Vps45P97390 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps45P97390 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps45P97390 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps45P97390 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps45P97390 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vps45P97390 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps45P97390 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps45P97390 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps45P97390 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps45P97390 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps45P97390 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Vps45P97390 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vps45P97390 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps45P97390 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps45P97390 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps45P97390 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Vps45P97390 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps45P97390 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps45P97390 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps45P97390 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps45P97390 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps45P97390 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vps45P97390 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps45P97390 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps45P97390 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vps45P97390 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.22□□□□□ -0.13
Vps45P97390 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.22□□□□□ -0.13
Vps45P97390 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps45P97390 Gm19220-201ENSMUST00000222682 803 ntBASIC14.22□□□□□ -0.13
Vps45P97390 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms