Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx2-3P97334 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC17.2■□□□□ 0.34
Nkx2-3P97334 Gm43133-201ENSMUST00000197472 463 ntBASIC17.2■□□□□ 0.34
Nkx2-3P97334 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC17.2■□□□□ 0.34
Nkx2-3P97334 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx2-3P97334 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx2-3P97334 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx2-3P97334 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC17.2■□□□□ 0.34
Nkx2-3P97334 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx2-3P97334 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx2-3P97334 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx2-3P97334 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx2-3P97334 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx2-3P97334 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Nkx2-3P97334 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx2-3P97334 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC17.2■□□□□ 0.34
Nkx2-3P97334 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Nkx2-3P97334 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.19■□□□□ 0.34
Nkx2-3P97334 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx2-3P97334 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx2-3P97334 Gm11793-201ENSMUST00000120433 981 ntBASIC17.19■□□□□ 0.34
Nkx2-3P97334 Gm11658-201ENSMUST00000120913 1008 ntBASIC17.19■□□□□ 0.34
Nkx2-3P97334 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC17.19■□□□□ 0.34
Nkx2-3P97334 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC17.19■□□□□ 0.34
Nkx2-3P97334 Gm2467-201ENSMUST00000182266 1010 ntBASIC17.19■□□□□ 0.34
Nkx2-3P97334 Gm6981-201ENSMUST00000182467 1008 ntBASIC17.19■□□□□ 0.34
Nkx2-3P97334 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Nkx2-3P97334 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC17.19■□□□□ 0.34
Nkx2-3P97334 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx2-3P97334 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC17.19■□□□□ 0.34
Nkx2-3P97334 AC154171.1-201ENSMUST00000224610 643 ntBASIC17.19■□□□□ 0.34
Nkx2-3P97334 AC140406.1-201ENSMUST00000226481 465 ntBASIC17.19■□□□□ 0.34
Nkx2-3P97334 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx2-3P97334 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx2-3P97334 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx2-3P97334 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Nkx2-3P97334 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx2-3P97334 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx2-3P97334 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx2-3P97334 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx2-3P97334 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx2-3P97334 Gm43423-201ENSMUST00000198390 2094 ntBASIC17.19■□□□□ 0.34
Nkx2-3P97334 Gm14608-201ENSMUST00000120030 1553 ntBASIC17.19■□□□□ 0.34
Nkx2-3P97334 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx2-3P97334 Gm42872-201ENSMUST00000200026 1967 ntBASIC17.19■□□□□ 0.34
Nkx2-3P97334 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Nkx2-3P97334 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx2-3P97334 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx2-3P97334 Gm45760-201ENSMUST00000212190 1782 ntBASIC17.18■□□□□ 0.34
Nkx2-3P97334 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx2-3P97334 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx2-3P97334 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC17.18■□□□□ 0.34
Nkx2-3P97334 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC17.18■□□□□ 0.34
Nkx2-3P97334 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Nkx2-3P97334 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC17.18■□□□□ 0.34
Nkx2-3P97334 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC17.18■□□□□ 0.34
Nkx2-3P97334 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC17.18■□□□□ 0.34
Nkx2-3P97334 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Nkx2-3P97334 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Nkx2-3P97334 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx2-3P97334 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Nkx2-3P97334 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx2-3P97334 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx2-3P97334 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx2-3P97334 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx2-3P97334 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Nkx2-3P97334 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx2-3P97334 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx2-3P97334 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx2-3P97334 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx2-3P97334 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx2-3P97334 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Nkx2-3P97334 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx2-3P97334 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx2-3P97334 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC17.17■□□□□ 0.34
Nkx2-3P97334 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx2-3P97334 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx2-3P97334 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx2-3P97334 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Nkx2-3P97334 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.17■□□□□ 0.34
Nkx2-3P97334 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC17.17■□□□□ 0.34
Nkx2-3P97334 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx2-3P97334 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx2-3P97334 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC17.17■□□□□ 0.34
Nkx2-3P97334 AC139350.1-201ENSMUST00000227064 1594 ntBASIC17.17■□□□□ 0.34
Nkx2-3P97334 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Nkx2-3P97334 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx2-3P97334 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx2-3P97334 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx2-3P97334 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Nkx2-3P97334 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx2-3P97334 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC17.17■□□□□ 0.34
Nkx2-3P97334 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Nkx2-3P97334 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx2-3P97334 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx2-3P97334 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx2-3P97334 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC17.17■□□□□ 0.34
Nkx2-3P97334 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC17.17■□□□□ 0.34
Nkx2-3P97334 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-3P97334 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms