Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-1P50220 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-1P50220 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-1P50220 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-1P50220 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.42□□□□□ -0.58
Nkx2-1P50220 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-1P50220 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-1P50220 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Nkx2-1P50220 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-1P50220 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-1P50220 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx2-1P50220 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx2-1P50220 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx2-1P50220 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Nkx2-1P50220 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Nkx2-1P50220 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx2-1P50220 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx2-1P50220 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Nkx2-1P50220 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx2-1P50220 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.41□□□□□ -0.58
Nkx2-1P50220 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx2-1P50220 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Nkx2-1P50220 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx2-1P50220 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx2-1P50220 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC11.41□□□□□ -0.58
Nkx2-1P50220 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx2-1P50220 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx2-1P50220 Gm12882-201ENSMUST00000121696 517 ntBASIC11.41□□□□□ -0.58
Nkx2-1P50220 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Nkx2-1P50220 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC11.41□□□□□ -0.58
Nkx2-1P50220 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC11.41□□□□□ -0.58
Nkx2-1P50220 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC11.41□□□□□ -0.58
Nkx2-1P50220 AC154222.1-201ENSMUST00000223882 475 ntBASIC11.41□□□□□ -0.58
Nkx2-1P50220 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx2-1P50220 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx2-1P50220 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx2-1P50220 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx2-1P50220 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx2-1P50220 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx2-1P50220 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx2-1P50220 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx2-1P50220 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC11.41□□□□□ -0.58
Nkx2-1P50220 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx2-1P50220 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx2-1P50220 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx2-1P50220 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx2-1P50220 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx2-1P50220 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Nkx2-1P50220 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx2-1P50220 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Nkx2-1P50220 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx2-1P50220 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx2-1P50220 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx2-1P50220 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx2-1P50220 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx2-1P50220 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx2-1P50220 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Nkx2-1P50220 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx2-1P50220 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx2-1P50220 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx2-1P50220 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Nkx2-1P50220 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx2-1P50220 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx2-1P50220 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx2-1P50220 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx2-1P50220 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.4□□□□□ -0.58
Nkx2-1P50220 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx2-1P50220 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx2-1P50220 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx2-1P50220 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx2-1P50220 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC11.4□□□□□ -0.58
Nkx2-1P50220 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC11.4□□□□□ -0.58
Nkx2-1P50220 Gm16198-201ENSMUST00000118766 670 ntBASIC11.4□□□□□ -0.58
Nkx2-1P50220 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx2-1P50220 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx2-1P50220 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC11.4□□□□□ -0.58
Nkx2-1P50220 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC11.4□□□□□ -0.58
Nkx2-1P50220 Psmb5-202ENSMUST00000227257 622 ntBASIC11.4□□□□□ -0.58
Nkx2-1P50220 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx2-1P50220 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx2-1P50220 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Nkx2-1P50220 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.4□□□□□ -0.58
Nkx2-1P50220 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx2-1P50220 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx2-1P50220 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC11.4□□□□□ -0.58
Nkx2-1P50220 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx2-1P50220 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx2-1P50220 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx2-1P50220 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.4□□□□□ -0.58
Nkx2-1P50220 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx2-1P50220 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx2-1P50220 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx2-1P50220 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Nkx2-1P50220 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Nkx2-1P50220 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Nkx2-1P50220 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Nkx2-1P50220 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Nkx2-1P50220 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx2-1P50220 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nkx2-1P50220 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms