Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox18P43680 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox18P43680 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sox18P43680 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Sox18P43680 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
Sox18P43680 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox18P43680 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Sox18P43680 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox18P43680 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox18P43680 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox18P43680 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sox18P43680 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox18P43680 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Sox18P43680 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox18P43680 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Sox18P43680 Gm12882-201ENSMUST00000121696 517 ntBASIC13.23□□□□□ -0.29
Sox18P43680 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sox18P43680 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.23□□□□□ -0.29
Sox18P43680 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox18P43680 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox18P43680 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sox18P43680 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox18P43680 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.23□□□□□ -0.29
Sox18P43680 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.23□□□□□ -0.29
Sox18P43680 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.23□□□□□ -0.29
Sox18P43680 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.23□□□□□ -0.29
Sox18P43680 CT025561.1-201ENSMUST00000214972 674 ntBASIC13.23□□□□□ -0.29
Sox18P43680 Gm17823-201ENSMUST00000217830 1006 ntBASIC13.23□□□□□ -0.29
Sox18P43680 CT573034.1-201ENSMUST00000222983 313 ntBASIC13.23□□□□□ -0.29
Sox18P43680 Cts7-204ENSMUST00000225321 1257 ntBASIC13.23□□□□□ -0.29
Sox18P43680 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox18P43680 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox18P43680 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.23□□□□□ -0.29
Sox18P43680 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox18P43680 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sox18P43680 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox18P43680 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox18P43680 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox18P43680 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox18P43680 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox18P43680 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Sox18P43680 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Sox18P43680 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox18P43680 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sox18P43680 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox18P43680 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sox18P43680 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Sox18P43680 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox18P43680 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox18P43680 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sox18P43680 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox18P43680 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox18P43680 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.22□□□□□ -0.29
Sox18P43680 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Sox18P43680 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox18P43680 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox18P43680 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox18P43680 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Sox18P43680 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.22□□□□□ -0.29
Sox18P43680 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sox18P43680 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sox18P43680 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC13.22□□□□□ -0.29
Sox18P43680 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox18P43680 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.22□□□□□ -0.29
Sox18P43680 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Sox18P43680 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC13.22□□□□□ -0.29
Sox18P43680 Gm38000-201ENSMUST00000192390 1215 ntBASIC13.22□□□□□ -0.29
Sox18P43680 Gm37008-201ENSMUST00000195712 319 ntBASIC13.22□□□□□ -0.29
Sox18P43680 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC13.22□□□□□ -0.29
Sox18P43680 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC13.22□□□□□ -0.29
Sox18P43680 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC13.22□□□□□ -0.29
Sox18P43680 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC13.22□□□□□ -0.29
Sox18P43680 CT009754.4-201ENSMUST00000221430 565 ntBASIC13.22□□□□□ -0.29
Sox18P43680 AC140406.1-201ENSMUST00000226481 465 ntBASIC13.22□□□□□ -0.29
Sox18P43680 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox18P43680 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Sox18P43680 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox18P43680 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sox18P43680 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox18P43680 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sox18P43680 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox18P43680 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.22□□□□□ -0.29
Sox18P43680 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Sox18P43680 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sox18P43680 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.22□□□□□ -0.29
Sox18P43680 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.21□□□□□ -0.29
Sox18P43680 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.21□□□□□ -0.29
Sox18P43680 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox18P43680 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox18P43680 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox18P43680 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Sox18P43680 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sox18P43680 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.21□□□□□ -0.29
Sox18P43680 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Sox18P43680 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sox18P43680 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox18P43680 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox18P43680 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox18P43680 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Sox18P43680 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms