Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-2P42586 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-2P42586 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.63□□□□□ -0.39
Nkx2-2P42586 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.63□□□□□ -0.39
Nkx2-2P42586 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-2P42586 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-2P42586 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Nkx2-2P42586 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-2P42586 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.63□□□□□ -0.39
Nkx2-2P42586 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-2P42586 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-2P42586 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-2P42586 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-2P42586 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Nkx2-2P42586 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-2P42586 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-2P42586 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.62□□□□□ -0.39
Nkx2-2P42586 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.62□□□□□ -0.39
Nkx2-2P42586 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.62□□□□□ -0.39
Nkx2-2P42586 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.62□□□□□ -0.39
Nkx2-2P42586 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-2P42586 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.62□□□□□ -0.39
Nkx2-2P42586 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-2P42586 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-2P42586 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.62□□□□□ -0.39
Nkx2-2P42586 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Nkx2-2P42586 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-2P42586 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-2P42586 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-2P42586 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-2P42586 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Nkx2-2P42586 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-2P42586 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.62□□□□□ -0.39
Nkx2-2P42586 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.62□□□□□ -0.39
Nkx2-2P42586 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.62□□□□□ -0.39
Nkx2-2P42586 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-2P42586 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.62□□□□□ -0.39
Nkx2-2P42586 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-2P42586 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Nkx2-2P42586 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-2P42586 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-2P42586 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-2P42586 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-2P42586 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-2P42586 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-2P42586 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-2P42586 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-2P42586 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.62□□□□□ -0.39
Nkx2-2P42586 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-2P42586 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-2P42586 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-2P42586 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Nkx2-2P42586 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.62□□□□□ -0.39
Nkx2-2P42586 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-2P42586 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-2P42586 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.62□□□□□ -0.39
Nkx2-2P42586 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-2P42586 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nkx2-2P42586 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.62□□□□□ -0.39
Nkx2-2P42586 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Nkx2-2P42586 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.62□□□□□ -0.39
Nkx2-2P42586 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-2P42586 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.61□□□□□ -0.39
Nkx2-2P42586 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.61□□□□□ -0.39
Nkx2-2P42586 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-2P42586 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-2P42586 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-2P42586 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-2P42586 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-2P42586 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-2P42586 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-2P42586 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-2P42586 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Nkx2-2P42586 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-2P42586 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
Nkx2-2P42586 Gm14057-201ENSMUST00000120631 482 ntBASIC12.61□□□□□ -0.39
Nkx2-2P42586 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.61□□□□□ -0.39
Nkx2-2P42586 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.61□□□□□ -0.39
Nkx2-2P42586 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.61□□□□□ -0.39
Nkx2-2P42586 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.61□□□□□ -0.39
Nkx2-2P42586 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.61□□□□□ -0.39
Nkx2-2P42586 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-2P42586 Gm9797-201ENSMUST00000052902 613 ntBASIC12.61□□□□□ -0.39
Nkx2-2P42586 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.61□□□□□ -0.39
Nkx2-2P42586 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-2P42586 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-2P42586 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-2P42586 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-2P42586 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-2P42586 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-2P42586 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-2P42586 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-2P42586 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-2P42586 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.61□□□□□ -0.39
Nkx2-2P42586 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Nkx2-2P42586 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-2P42586 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-2P42586 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Nkx2-2P42586 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Nkx2-2P42586 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms