Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TfamP40630 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
TfamP40630 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TfamP40630 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
TfamP40630 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.37□□□□□ -0.27
TfamP40630 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TfamP40630 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TfamP40630 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TfamP40630 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TfamP40630 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.37□□□□□ -0.27
TfamP40630 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TfamP40630 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TfamP40630 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
TfamP40630 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TfamP40630 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
TfamP40630 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TfamP40630 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
TfamP40630 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TfamP40630 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TfamP40630 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
TfamP40630 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TfamP40630 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.36□□□□□ -0.27
TfamP40630 Gm29741-201ENSMUST00000192667 421 ntBASIC13.36□□□□□ -0.27
TfamP40630 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.36□□□□□ -0.27
TfamP40630 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.36□□□□□ -0.27
TfamP40630 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TfamP40630 Dupd1-202ENSMUST00000224735 548 ntBASIC13.36□□□□□ -0.27
TfamP40630 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.36□□□□□ -0.27
TfamP40630 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
TfamP40630 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
TfamP40630 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TfamP40630 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TfamP40630 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TfamP40630 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.36□□□□□ -0.27
TfamP40630 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TfamP40630 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TfamP40630 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TfamP40630 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TfamP40630 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.36□□□□□ -0.27
TfamP40630 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.36□□□□□ -0.27
TfamP40630 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TfamP40630 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.36□□□□□ -0.27
TfamP40630 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
TfamP40630 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TfamP40630 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TfamP40630 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
TfamP40630 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TfamP40630 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TfamP40630 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TfamP40630 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TfamP40630 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TfamP40630 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TfamP40630 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.35□□□□□ -0.27
TfamP40630 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.35□□□□□ -0.27
TfamP40630 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TfamP40630 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TfamP40630 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TfamP40630 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TfamP40630 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
TfamP40630 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TfamP40630 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TfamP40630 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TfamP40630 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.35□□□□□ -0.27
TfamP40630 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TfamP40630 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.35□□□□□ -0.27
TfamP40630 Gm37714-201ENSMUST00000194742 342 ntBASIC13.35□□□□□ -0.27
TfamP40630 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
TfamP40630 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
TfamP40630 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TfamP40630 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TfamP40630 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TfamP40630 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TfamP40630 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.35□□□□□ -0.27
TfamP40630 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TfamP40630 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TfamP40630 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TfamP40630 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TfamP40630 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TfamP40630 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TfamP40630 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TfamP40630 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TfamP40630 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.34□□□□□ -0.27
TfamP40630 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TfamP40630 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TfamP40630 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TfamP40630 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TfamP40630 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
TfamP40630 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
TfamP40630 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TfamP40630 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.34□□□□□ -0.27
TfamP40630 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TfamP40630 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TfamP40630 Gm6916-202ENSMUST00000205523 195 ntBASIC13.34□□□□□ -0.27
TfamP40630 Gm16476-201ENSMUST00000221544 139 ntBASIC13.34□□□□□ -0.27
TfamP40630 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.34□□□□□ -0.27
TfamP40630 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TfamP40630 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TfamP40630 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TfamP40630 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TfamP40630 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms