Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm26506-201ENSMUST00000179692 110 ntBASIC14.46□□□□□ -0.09
Usp4P35123 Gm25086-201ENSMUST00000179931 110 ntBASIC14.46□□□□□ -0.09
Usp4P35123 Gm23243-201ENSMUST00000180047 110 ntBASIC14.46□□□□□ -0.09
Usp4P35123 Gm24659-201ENSMUST00000180212 110 ntBASIC14.46□□□□□ -0.09
Usp4P35123 Gm24169-201ENSMUST00000180244 110 ntBASIC14.46□□□□□ -0.09
Usp4P35123 Gm23689-201ENSMUST00000180354 110 ntBASIC14.46□□□□□ -0.09
Usp4P35123 Gm27359-201ENSMUST00000184153 110 ntBASIC14.46□□□□□ -0.09
Usp4P35123 Gm27785-201ENSMUST00000184268 110 ntBASIC14.46□□□□□ -0.09
Usp4P35123 Gm27466-201ENSMUST00000184396 110 ntBASIC14.46□□□□□ -0.09
Usp4P35123 Gm27703-201ENSMUST00000184836 110 ntBASIC14.46□□□□□ -0.09
Usp4P35123 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.46□□□□□ -0.09
Usp4P35123 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.46□□□□□ -0.09
Usp4P35123 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.46□□□□□ -0.09
Usp4P35123 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Usp4P35123 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Usp4P35123 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.46□□□□□ -0.09
Usp4P35123 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Usp4P35123 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Usp4P35123 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Usp4P35123 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Usp4P35123 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Usp4P35123 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Usp4P35123 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Usp4P35123 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Usp4P35123 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
Usp4P35123 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Usp4P35123 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Usp4P35123 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Usp4P35123 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.46□□□□□ -0.1
Usp4P35123 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Usp4P35123 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp4P35123 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp4P35123 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Usp4P35123 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp4P35123 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp4P35123 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Usp4P35123 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp4P35123 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp4P35123 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp4P35123 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Usp4P35123 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Usp4P35123 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp4P35123 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp4P35123 Gm25287-201ENSMUST00000103846 110 ntBASIC14.45□□□□□ -0.1
Usp4P35123 Gm22918-201ENSMUST00000103855 110 ntBASIC14.45□□□□□ -0.1
Usp4P35123 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp4P35123 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Usp4P35123 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Usp4P35123 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.45□□□□□ -0.1
Usp4P35123 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp4P35123 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Usp4P35123 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.45□□□□□ -0.1
Usp4P35123 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Usp4P35123 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.45□□□□□ -0.1
Usp4P35123 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.45□□□□□ -0.1
Usp4P35123 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp4P35123 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp4P35123 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp4P35123 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Usp4P35123 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.45□□□□□ -0.1
Usp4P35123 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp4P35123 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.45□□□□□ -0.1
Usp4P35123 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Usp4P35123 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp4P35123 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp4P35123 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp4P35123 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp4P35123 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Usp4P35123 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp4P35123 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp4P35123 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Usp4P35123 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp4P35123 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp4P35123 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp4P35123 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.44□□□□□ -0.1
Usp4P35123 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Usp4P35123 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp4P35123 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp4P35123 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp4P35123 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp4P35123 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp4P35123 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp4P35123 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.44□□□□□ -0.1
Usp4P35123 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.44□□□□□ -0.1
Usp4P35123 Gm44608-201ENSMUST00000206827 855 ntBASIC14.44□□□□□ -0.1
Usp4P35123 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp4P35123 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Usp4P35123 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp4P35123 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Usp4P35123 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Usp4P35123 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp4P35123 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Usp4P35123 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp4P35123 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp4P35123 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Usp4P35123 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp4P35123 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Usp4P35123 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Usp4P35123 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp4P35123 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms