Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc5P32043 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.81□□□□□ -0.36
Hoxc5P32043 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Hoxc5P32043 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc5P32043 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc5P32043 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc5P32043 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Hoxc5P32043 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Hoxc5P32043 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc5P32043 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.8□□□□□ -0.36
Hoxc5P32043 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc5P32043 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc5P32043 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc5P32043 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc5P32043 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.8□□□□□ -0.36
Hoxc5P32043 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc5P32043 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc5P32043 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc5P32043 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.8□□□□□ -0.36
Hoxc5P32043 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc5P32043 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc5P32043 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.8□□□□□ -0.36
Hoxc5P32043 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc5P32043 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc5P32043 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc5P32043 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc5P32043 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.8□□□□□ -0.36
Hoxc5P32043 Dupd1-202ENSMUST00000224735 548 ntBASIC12.8□□□□□ -0.36
Hoxc5P32043 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.8□□□□□ -0.36
Hoxc5P32043 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc5P32043 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc5P32043 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Hoxc5P32043 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc5P32043 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc5P32043 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Hoxc5P32043 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc5P32043 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc5P32043 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc5P32043 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc5P32043 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc5P32043 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc5P32043 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.8□□□□□ -0.36
Hoxc5P32043 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc5P32043 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Hoxc5P32043 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc5P32043 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.8□□□□□ -0.36
Hoxc5P32043 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc5P32043 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc5P32043 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc5P32043 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc5P32043 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc5P32043 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc5P32043 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Hoxc5P32043 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc5P32043 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc5P32043 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc5P32043 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc5P32043 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc5P32043 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Hoxc5P32043 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc5P32043 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc5P32043 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc5P32043 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc5P32043 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc5P32043 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc5P32043 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Hoxc5P32043 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc5P32043 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.79□□□□□ -0.36
Hoxc5P32043 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.79□□□□□ -0.36
Hoxc5P32043 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc5P32043 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Hoxc5P32043 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc5P32043 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.79□□□□□ -0.36
Hoxc5P32043 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.79□□□□□ -0.36
Hoxc5P32043 Gm27702-201ENSMUST00000184512 56 ntBASIC12.79□□□□□ -0.36
Hoxc5P32043 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc5P32043 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc5P32043 Gm7774-201ENSMUST00000200064 533 ntBASIC12.79□□□□□ -0.36
Hoxc5P32043 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.79□□□□□ -0.36
Hoxc5P32043 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Hoxc5P32043 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc5P32043 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc5P32043 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Hoxc5P32043 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.79□□□□□ -0.36
Hoxc5P32043 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Hoxc5P32043 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc5P32043 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc5P32043 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc5P32043 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Hoxc5P32043 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Hoxc5P32043 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc5P32043 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.79□□□□□ -0.36
Hoxc5P32043 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc5P32043 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc5P32043 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc5P32043 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.78□□□□□ -0.36
Hoxc5P32043 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc5P32043 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc5P32043 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc5P32043 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms