Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.83□□□□□ -0.2
RxrbP28704 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
RxrbP28704 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RxrbP28704 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RxrbP28704 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RxrbP28704 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
RxrbP28704 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.83□□□□□ -0.2
RxrbP28704 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
RxrbP28704 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RxrbP28704 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RxrbP28704 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RxrbP28704 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
RxrbP28704 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RxrbP28704 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RxrbP28704 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RxrbP28704 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RxrbP28704 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RxrbP28704 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RxrbP28704 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RxrbP28704 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RxrbP28704 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RxrbP28704 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
RxrbP28704 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
RxrbP28704 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RxrbP28704 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
RxrbP28704 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RxrbP28704 Gm6973-201ENSMUST00000117080 721 ntBASIC13.82□□□□□ -0.2
RxrbP28704 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RxrbP28704 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
RxrbP28704 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.82□□□□□ -0.2
RxrbP28704 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
RxrbP28704 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.82□□□□□ -0.2
RxrbP28704 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
RxrbP28704 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RxrbP28704 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RxrbP28704 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RxrbP28704 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
RxrbP28704 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.82□□□□□ -0.2
RxrbP28704 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RxrbP28704 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.82□□□□□ -0.2
RxrbP28704 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RxrbP28704 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
RxrbP28704 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RxrbP28704 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
RxrbP28704 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.82□□□□□ -0.2
RxrbP28704 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RxrbP28704 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
RxrbP28704 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RxrbP28704 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RxrbP28704 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RxrbP28704 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.81□□□□□ -0.2
RxrbP28704 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RxrbP28704 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RxrbP28704 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RxrbP28704 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
RxrbP28704 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RxrbP28704 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RxrbP28704 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
RxrbP28704 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RxrbP28704 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RxrbP28704 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RxrbP28704 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RxrbP28704 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RxrbP28704 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.81□□□□□ -0.2
RxrbP28704 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RxrbP28704 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.81□□□□□ -0.2
RxrbP28704 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
RxrbP28704 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.81□□□□□ -0.2
RxrbP28704 Gm17271-201ENSMUST00000165535 355 ntBASIC13.81□□□□□ -0.2
RxrbP28704 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
RxrbP28704 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
RxrbP28704 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.81□□□□□ -0.2
RxrbP28704 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RxrbP28704 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.81□□□□□ -0.2
RxrbP28704 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RxrbP28704 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RxrbP28704 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RxrbP28704 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.81□□□□□ -0.2
RxrbP28704 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RxrbP28704 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RxrbP28704 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.81□□□□□ -0.2
RxrbP28704 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RxrbP28704 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RxrbP28704 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.81□□□□□ -0.2
RxrbP28704 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RxrbP28704 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RxrbP28704 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RxrbP28704 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
RxrbP28704 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
RxrbP28704 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RxrbP28704 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RxrbP28704 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RxrbP28704 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.8□□□□□ -0.2
RxrbP28704 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RxrbP28704 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RxrbP28704 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RxrbP28704 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RxrbP28704 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.8□□□□□ -0.2
RxrbP28704 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.8□□□□□ -0.2
RxrbP28704 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms