Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl6P27784 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Ccl6P27784 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Ccl6P27784 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl6P27784 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl6P27784 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Ccl6P27784 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl6P27784 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC10.76□□□□□ -0.69
Ccl6P27784 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccl6P27784 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl6P27784 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl6P27784 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl6P27784 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl6P27784 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl6P27784 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl6P27784 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl6P27784 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl6P27784 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl6P27784 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl6P27784 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl6P27784 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl6P27784 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl6P27784 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl6P27784 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl6P27784 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl6P27784 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
Ccl6P27784 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl6P27784 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl6P27784 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl6P27784 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl6P27784 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl6P27784 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Ccl6P27784 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC10.75□□□□□ -0.69
Ccl6P27784 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC10.75□□□□□ -0.69
Ccl6P27784 Gm12428-201ENSMUST00000119844 727 ntBASIC10.75□□□□□ -0.69
Ccl6P27784 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC10.75□□□□□ -0.69
Ccl6P27784 Gm15693-201ENSMUST00000120470 637 ntBASIC10.75□□□□□ -0.69
Ccl6P27784 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
Ccl6P27784 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl6P27784 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl6P27784 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl6P27784 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
Ccl6P27784 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Ccl6P27784 Gm27533-201ENSMUST00000183800 152 ntBASIC10.75□□□□□ -0.69
Ccl6P27784 Gm46209-201ENSMUST00000217912 553 ntBASIC10.75□□□□□ -0.69
Ccl6P27784 Gm6888-201ENSMUST00000221983 706 ntBASIC10.75□□□□□ -0.69
Ccl6P27784 CT030704.2-201ENSMUST00000228887 494 ntBASIC10.75□□□□□ -0.69
Ccl6P27784 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
Ccl6P27784 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl6P27784 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl6P27784 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Ccl6P27784 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl6P27784 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl6P27784 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl6P27784 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl6P27784 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl6P27784 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl6P27784 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl6P27784 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC10.75□□□□□ -0.69
Ccl6P27784 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl6P27784 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl6P27784 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl6P27784 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl6P27784 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl6P27784 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl6P27784 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl6P27784 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Ccl6P27784 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl6P27784 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl6P27784 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl6P27784 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccl6P27784 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl6P27784 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl6P27784 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Ccl6P27784 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl6P27784 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl6P27784 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl6P27784 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl6P27784 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Ccl6P27784 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl6P27784 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC10.74□□□□□ -0.69
Ccl6P27784 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Ccl6P27784 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC10.74□□□□□ -0.69
Ccl6P27784 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl6P27784 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl6P27784 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl6P27784 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl6P27784 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl6P27784 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC10.74□□□□□ -0.69
Ccl6P27784 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl6P27784 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl6P27784 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC10.74□□□□□ -0.69
Ccl6P27784 AC139350.3-201ENSMUST00000226151 420 ntBASIC10.74□□□□□ -0.69
Ccl6P27784 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl6P27784 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl6P27784 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl6P27784 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC10.74□□□□□ -0.69
Ccl6P27784 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccl6P27784 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
Ccl6P27784 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms