Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Hoxc6P10629 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc6P10629 Gm18934-201ENSMUST00000216671 1044 ntBASIC15.21■□□□□ 0.03
Hoxc6P10629 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC15.21■□□□□ 0.03
Hoxc6P10629 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Hoxc6P10629 CT485787.1-201ENSMUST00000225617 968 ntBASIC15.21■□□□□ 0.03
Hoxc6P10629 CT573086.1-201ENSMUST00000227202 1074 ntBASIC15.21■□□□□ 0.03
Hoxc6P10629 AC131997.1-201ENSMUST00000228611 1229 ntBASIC15.21■□□□□ 0.03
Hoxc6P10629 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc6P10629 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Hoxc6P10629 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc6P10629 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc6P10629 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc6P10629 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc6P10629 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Hoxc6P10629 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hoxc6P10629 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Hoxc6P10629 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Hoxc6P10629 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Hoxc6P10629 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Hoxc6P10629 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Hoxc6P10629 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Hoxc6P10629 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Hoxc6P10629 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.2■□□□□ 0.02
Hoxc6P10629 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Hoxc6P10629 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Hoxc6P10629 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Hoxc6P10629 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hoxc6P10629 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC15.2■□□□□ 0.02
Hoxc6P10629 Gm13342-201ENSMUST00000121055 207 ntBASIC15.2■□□□□ 0.02
Hoxc6P10629 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Hoxc6P10629 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC15.2■□□□□ 0.02
Hoxc6P10629 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC15.2■□□□□ 0.02
Hoxc6P10629 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC15.2■□□□□ 0.02
Hoxc6P10629 AC140406.1-201ENSMUST00000226481 465 ntBASIC15.2■□□□□ 0.02
Hoxc6P10629 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Hoxc6P10629 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hoxc6P10629 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hoxc6P10629 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hoxc6P10629 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Hoxc6P10629 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hoxc6P10629 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hoxc6P10629 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Hoxc6P10629 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hoxc6P10629 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hoxc6P10629 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hoxc6P10629 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hoxc6P10629 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Hoxc6P10629 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hoxc6P10629 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hoxc6P10629 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC15.19■□□□□ 0.02
Hoxc6P10629 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hoxc6P10629 Gm12537-201ENSMUST00000119266 1002 ntBASIC15.19■□□□□ 0.02
Hoxc6P10629 Gm12070-201ENSMUST00000119551 1002 ntBASIC15.19■□□□□ 0.02
Hoxc6P10629 Gm12671-201ENSMUST00000119978 1002 ntBASIC15.19■□□□□ 0.02
Hoxc6P10629 Gm13292-201ENSMUST00000120014 1000 ntBASIC15.19■□□□□ 0.02
Hoxc6P10629 Gm12403-201ENSMUST00000121384 959 ntBASIC15.19■□□□□ 0.02
Hoxc6P10629 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Hoxc6P10629 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC15.19■□□□□ 0.02
Hoxc6P10629 Mir3102-201ENSMUST00000175555 104 ntBASIC15.19■□□□□ 0.02
Hoxc6P10629 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hoxc6P10629 Gm10359-201ENSMUST00000180167 1002 ntBASIC15.19■□□□□ 0.02
Hoxc6P10629 Gm12033-201ENSMUST00000180654 1002 ntBASIC15.19■□□□□ 0.02
Hoxc6P10629 Gm5559-201ENSMUST00000180755 1002 ntBASIC15.19■□□□□ 0.02
Hoxc6P10629 Gm4335-201ENSMUST00000182581 1004 ntBASIC15.19■□□□□ 0.02
Hoxc6P10629 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC15.19■□□□□ 0.02
Hoxc6P10629 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Hoxc6P10629 Gm43758-201ENSMUST00000199500 367 ntBASIC15.19■□□□□ 0.02
Hoxc6P10629 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Hoxc6P10629 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC15.19■□□□□ 0.02
Hoxc6P10629 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC15.19■□□□□ 0.02
Hoxc6P10629 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hoxc6P10629 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hoxc6P10629 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hoxc6P10629 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hoxc6P10629 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Hoxc6P10629 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Hoxc6P10629 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hoxc6P10629 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hoxc6P10629 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hoxc6P10629 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hoxc6P10629 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hoxc6P10629 Gm15544-201ENSMUST00000118776 1531 ntBASIC15.18■□□□□ 0.02
Hoxc6P10629 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hoxc6P10629 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC15.18■□□□□ 0.02
Hoxc6P10629 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hoxc6P10629 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Hoxc6P10629 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hoxc6P10629 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hoxc6P10629 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Hoxc6P10629 Gm15770-201ENSMUST00000117498 584 ntBASIC15.18■□□□□ 0.02
Hoxc6P10629 Gm13369-201ENSMUST00000119442 987 ntBASIC15.18■□□□□ 0.02
Hoxc6P10629 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC15.18■□□□□ 0.02
Hoxc6P10629 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Hoxc6P10629 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Hoxc6P10629 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Hoxc6P10629 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC15.18■□□□□ 0.02
Hoxc6P10629 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Hoxc6P10629 Gm18827-201ENSMUST00000188341 790 ntBASIC15.18■□□□□ 0.02
Hoxc6P10629 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms