Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxa4P06798 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxa4P06798 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxa4P06798 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxa4P06798 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxa4P06798 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxa4P06798 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.54□□□□□ -0.24
Hoxa4P06798 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxa4P06798 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxa4P06798 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Hoxa4P06798 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.54□□□□□ -0.24
Hoxa4P06798 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxa4P06798 Gm6180-201ENSMUST00000065243 498 ntBASIC13.54□□□□□ -0.24
Hoxa4P06798 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxa4P06798 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxa4P06798 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxa4P06798 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxa4P06798 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxa4P06798 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxa4P06798 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
Hoxa4P06798 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxa4P06798 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.54□□□□□ -0.24
Hoxa4P06798 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.54□□□□□ -0.24
Hoxa4P06798 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.54□□□□□ -0.24
Hoxa4P06798 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxa4P06798 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxa4P06798 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxa4P06798 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxa4P06798 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hoxa4P06798 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxa4P06798 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.53□□□□□ -0.24
Hoxa4P06798 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Hoxa4P06798 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxa4P06798 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Hoxa4P06798 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxa4P06798 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxa4P06798 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxa4P06798 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxa4P06798 Gm14928-201ENSMUST00000120198 477 ntBASIC13.53□□□□□ -0.24
Hoxa4P06798 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxa4P06798 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxa4P06798 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxa4P06798 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Hoxa4P06798 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxa4P06798 Gm27701-201ENSMUST00000184498 110 ntBASIC13.53□□□□□ -0.24
Hoxa4P06798 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.53□□□□□ -0.24
Hoxa4P06798 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxa4P06798 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxa4P06798 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxa4P06798 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.53□□□□□ -0.24
Hoxa4P06798 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxa4P06798 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxa4P06798 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxa4P06798 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxa4P06798 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.53□□□□□ -0.24
Hoxa4P06798 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxa4P06798 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxa4P06798 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxa4P06798 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxa4P06798 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxa4P06798 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hoxa4P06798 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hoxa4P06798 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
Hoxa4P06798 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.52□□□□□ -0.24
Hoxa4P06798 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Hoxa4P06798 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hoxa4P06798 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Hoxa4P06798 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hoxa4P06798 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hoxa4P06798 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Hoxa4P06798 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxa4P06798 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxa4P06798 Gm15371-201ENSMUST00000117057 784 ntBASIC13.52□□□□□ -0.25
Hoxa4P06798 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxa4P06798 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.52□□□□□ -0.25
Hoxa4P06798 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.52□□□□□ -0.25
Hoxa4P06798 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.52□□□□□ -0.25
Hoxa4P06798 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxa4P06798 Gm38223-201ENSMUST00000194484 695 ntBASIC13.52□□□□□ -0.25
Hoxa4P06798 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
Hoxa4P06798 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Hoxa4P06798 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxa4P06798 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxa4P06798 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxa4P06798 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxa4P06798 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxa4P06798 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxa4P06798 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.52□□□□□ -0.25
Hoxa4P06798 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.52□□□□□ -0.25
Hoxa4P06798 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxa4P06798 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxa4P06798 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxa4P06798 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Hoxa4P06798 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Hoxa4P06798 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxa4P06798 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.52□□□□□ -0.25
Hoxa4P06798 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hoxa4P06798 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa4P06798 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxa4P06798 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms