Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P04213 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P04213 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
P04213 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.22□□□□□ -0.29
P04213 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P04213 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P04213 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
P04213 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
P04213 Gm13223-201ENSMUST00000118609 747 ntBASIC13.22□□□□□ -0.29
P04213 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.22□□□□□ -0.29
P04213 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.22□□□□□ -0.29
P04213 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P04213 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.22□□□□□ -0.29
P04213 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
P04213 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P04213 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
P04213 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.22□□□□□ -0.29
P04213 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P04213 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
P04213 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P04213 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
P04213 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
P04213 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.22□□□□□ -0.29
P04213 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P04213 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
P04213 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.22□□□□□ -0.29
P04213 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P04213 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P04213 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P04213 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P04213 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
P04213 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
P04213 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P04213 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
P04213 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P04213 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
P04213 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
P04213 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.21□□□□□ -0.29
P04213 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P04213 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
P04213 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.21□□□□□ -0.29
P04213 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P04213 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
P04213 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P04213 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
P04213 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
P04213 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P04213 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.21□□□□□ -0.29
P04213 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
P04213 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
P04213 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
P04213 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P04213 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P04213 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
P04213 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P04213 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P04213 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
P04213 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
P04213 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
P04213 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
P04213 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P04213 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.21□□□□□ -0.29
P04213 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
P04213 Gm44344-201ENSMUST00000200287 129 ntBASIC13.21□□□□□ -0.29
P04213 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
P04213 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
P04213 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.21□□□□□ -0.29
P04213 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
P04213 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
P04213 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.21□□□□□ -0.29
P04213 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P04213 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.21□□□□□ -0.29
P04213 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
P04213 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.21□□□□□ -0.29
P04213 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.21□□□□□ -0.29
P04213 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
P04213 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
P04213 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
P04213 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
P04213 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
P04213 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
P04213 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.21□□□□□ -0.3
P04213 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
P04213 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.21□□□□□ -0.3
P04213 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
P04213 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
P04213 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
P04213 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P04213 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
P04213 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.2□□□□□ -0.3
P04213 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
P04213 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P04213 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
P04213 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
P04213 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
P04213 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P04213 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
P04213 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
P04213 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
P04213 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms