Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.75□□□□□ -0.37
Tnfrsf17O88472 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.75□□□□□ -0.37
Tnfrsf17O88472 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Tnfrsf17O88472 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tnfrsf17O88472 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tnfrsf17O88472 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tnfrsf17O88472 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tnfrsf17O88472 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tnfrsf17O88472 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tnfrsf17O88472 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tnfrsf17O88472 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tnfrsf17O88472 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tnfrsf17O88472 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tnfrsf17O88472 Mir497b-201ENSMUST00000093601 125 ntBASIC12.75□□□□□ -0.37
Tnfrsf17O88472 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.75□□□□□ -0.37
Tnfrsf17O88472 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tnfrsf17O88472 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Tnfrsf17O88472 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tnfrsf17O88472 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tnfrsf17O88472 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf17O88472 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf17O88472 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Tnfrsf17O88472 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf17O88472 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf17O88472 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf17O88472 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.74□□□□□ -0.37
Tnfrsf17O88472 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf17O88472 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf17O88472 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf17O88472 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf17O88472 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf17O88472 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf17O88472 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf17O88472 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf17O88472 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Tnfrsf17O88472 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf17O88472 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Tnfrsf17O88472 Gm2260-201ENSMUST00000184965 657 ntBASIC12.74□□□□□ -0.37
Tnfrsf17O88472 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.74□□□□□ -0.37
Tnfrsf17O88472 Gm19208-201ENSMUST00000213861 912 ntBASIC12.74□□□□□ -0.37
Tnfrsf17O88472 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.74□□□□□ -0.37
Tnfrsf17O88472 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Tnfrsf17O88472 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf17O88472 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf17O88472 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf17O88472 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf17O88472 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.74□□□□□ -0.37
Tnfrsf17O88472 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf17O88472 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf17O88472 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf17O88472 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.74□□□□□ -0.37
Tnfrsf17O88472 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf17O88472 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf17O88472 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf17O88472 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf17O88472 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Tnfrsf17O88472 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf17O88472 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf17O88472 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Tnfrsf17O88472 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf17O88472 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf17O88472 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf17O88472 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.73□□□□□ -0.37
Tnfrsf17O88472 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf17O88472 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.73□□□□□ -0.37
Tnfrsf17O88472 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf17O88472 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf17O88472 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Tnfrsf17O88472 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf17O88472 Gm24830-201ENSMUST00000102024 166 ntBASIC12.73□□□□□ -0.37
Tnfrsf17O88472 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC12.73□□□□□ -0.37
Tnfrsf17O88472 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf17O88472 Gm25890-201ENSMUST00000177643 165 ntBASIC12.73□□□□□ -0.37
Tnfrsf17O88472 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.73□□□□□ -0.37
Tnfrsf17O88472 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.73□□□□□ -0.37
Tnfrsf17O88472 Gm22614-201ENSMUST00000178300 165 ntBASIC12.73□□□□□ -0.37
Tnfrsf17O88472 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC12.73□□□□□ -0.37
Tnfrsf17O88472 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.73□□□□□ -0.37
Tnfrsf17O88472 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.73□□□□□ -0.37
Tnfrsf17O88472 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf17O88472 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.73□□□□□ -0.37
Tnfrsf17O88472 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.73□□□□□ -0.37
Tnfrsf17O88472 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.73□□□□□ -0.37
Tnfrsf17O88472 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.73□□□□□ -0.37
Tnfrsf17O88472 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf17O88472 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.73□□□□□ -0.37
Tnfrsf17O88472 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf17O88472 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf17O88472 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Tnfrsf17O88472 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf17O88472 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Tnfrsf17O88472 Gm22042-201ENSMUST00000082989 165 ntBASIC12.73□□□□□ -0.37
Tnfrsf17O88472 Gm26232-201ENSMUST00000083360 166 ntBASIC12.73□□□□□ -0.37
Tnfrsf17O88472 Gm24136-201ENSMUST00000083374 165 ntBASIC12.73□□□□□ -0.37
Tnfrsf17O88472 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.73□□□□□ -0.37
Tnfrsf17O88472 Gm26110-201ENSMUST00000083971 165 ntBASIC12.73□□□□□ -0.37
Tnfrsf17O88472 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf17O88472 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf17O88472 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf17O88472 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms