Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.24□□□□□ -0.45
Col5a1O88207 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.24□□□□□ -0.45
Col5a1O88207 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.24□□□□□ -0.45
Col5a1O88207 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col5a1O88207 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Col5a1O88207 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col5a1O88207 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.24□□□□□ -0.45
Col5a1O88207 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.24□□□□□ -0.45
Col5a1O88207 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.24□□□□□ -0.45
Col5a1O88207 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col5a1O88207 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col5a1O88207 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Col5a1O88207 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Col5a1O88207 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col5a1O88207 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col5a1O88207 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col5a1O88207 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col5a1O88207 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col5a1O88207 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col5a1O88207 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col5a1O88207 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col5a1O88207 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col5a1O88207 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col5a1O88207 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col5a1O88207 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col5a1O88207 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col5a1O88207 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col5a1O88207 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col5a1O88207 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col5a1O88207 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col5a1O88207 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.23□□□□□ -0.45
Col5a1O88207 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.23□□□□□ -0.45
Col5a1O88207 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col5a1O88207 Gm37497-201ENSMUST00000195830 798 ntBASIC12.23□□□□□ -0.45
Col5a1O88207 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col5a1O88207 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col5a1O88207 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col5a1O88207 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col5a1O88207 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.23□□□□□ -0.45
Col5a1O88207 Gm10702-201ENSMUST00000098929 1268 ntBASIC12.23□□□□□ -0.45
Col5a1O88207 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col5a1O88207 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col5a1O88207 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col5a1O88207 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.23□□□□□ -0.45
Col5a1O88207 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col5a1O88207 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.23□□□□□ -0.45
Col5a1O88207 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.23□□□□□ -0.45
Col5a1O88207 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col5a1O88207 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.23□□□□□ -0.45
Col5a1O88207 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col5a1O88207 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col5a1O88207 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col5a1O88207 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col5a1O88207 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col5a1O88207 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col5a1O88207 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col5a1O88207 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.23□□□□□ -0.45
Col5a1O88207 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col5a1O88207 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col5a1O88207 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col5a1O88207 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col5a1O88207 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.23□□□□□ -0.45
Col5a1O88207 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col5a1O88207 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.23□□□□□ -0.45
Col5a1O88207 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Col5a1O88207 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col5a1O88207 Gm21769-201ENSMUST00000211922 111 ntBASIC12.23□□□□□ -0.45
Col5a1O88207 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.23□□□□□ -0.45
Col5a1O88207 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col5a1O88207 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col5a1O88207 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Col5a1O88207 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col5a1O88207 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Col5a1O88207 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.22□□□□□ -0.45
Col5a1O88207 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.22□□□□□ -0.45
Col5a1O88207 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Col5a1O88207 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Col5a1O88207 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Col5a1O88207 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col5a1O88207 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col5a1O88207 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC12.22□□□□□ -0.45
Col5a1O88207 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col5a1O88207 Gm25261-201ENSMUST00000157416 134 ntBASIC12.22□□□□□ -0.45
Col5a1O88207 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.22□□□□□ -0.45
Col5a1O88207 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Col5a1O88207 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.22□□□□□ -0.45
Col5a1O88207 Gm38144-201ENSMUST00000192790 465 ntBASIC12.22□□□□□ -0.45
Col5a1O88207 Gm43830-201ENSMUST00000198760 1067 ntBASIC12.22□□□□□ -0.45
Col5a1O88207 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col5a1O88207 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC12.22□□□□□ -0.45
Col5a1O88207 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col5a1O88207 Gm10146-201ENSMUST00000072739 309 ntBASIC12.22□□□□□ -0.45
Col5a1O88207 Gm10268-201ENSMUST00000085340 555 ntBASIC12.22□□□□□ -0.45
Col5a1O88207 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col5a1O88207 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col5a1O88207 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col5a1O88207 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col5a1O88207 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col5a1O88207 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col5a1O88207 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms