Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.6□□□□□ -0.39
Dkk1O54908 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Dkk1O54908 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Dkk1O54908 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Dkk1O54908 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Dkk1O54908 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Dkk1O54908 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Dkk1O54908 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Dkk1O54908 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Dkk1O54908 Hmgn2-203ENSMUST00000102553 1265 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Dkk1O54908 Gm2810-201ENSMUST00000118681 990 ntBASIC12.6□□□□□ -0.39
Dkk1O54908 Gm12105-201ENSMUST00000120846 779 ntBASIC12.6□□□□□ -0.39
Dkk1O54908 Gm13365-201ENSMUST00000121188 973 ntBASIC12.6□□□□□ -0.39
Dkk1O54908 Gm14822-201ENSMUST00000122247 291 ntBASIC12.6□□□□□ -0.39
Dkk1O54908 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Dkk1O54908 Gm14617-201ENSMUST00000128053 798 ntTSL 5 BASIC12.6□□□□□ -0.39
Dkk1O54908 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Dkk1O54908 Gm16129-201ENSMUST00000152628 486 ntBASIC12.6□□□□□ -0.39
Dkk1O54908 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.6□□□□□ -0.39
Dkk1O54908 Gm5479-201ENSMUST00000160578 435 ntBASIC12.6□□□□□ -0.39
Dkk1O54908 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.6□□□□□ -0.39
Dkk1O54908 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.6□□□□□ -0.39
Dkk1O54908 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Dkk1O54908 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC12.6□□□□□ -0.39
Dkk1O54908 Gm38256-201ENSMUST00000192097 950 ntTSL 5 BASIC12.6□□□□□ -0.39
Dkk1O54908 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Dkk1O54908 Gm18843-201ENSMUST00000194982 719 ntBASIC12.6□□□□□ -0.39
Dkk1O54908 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.6□□□□□ -0.39
Dkk1O54908 Gm8703-201ENSMUST00000203793 730 ntBASIC12.6□□□□□ -0.39
Dkk1O54908 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.6□□□□□ -0.39
Dkk1O54908 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC12.6□□□□□ -0.39
Dkk1O54908 Mrpl42-202ENSMUST00000217777 455 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Dkk1O54908 AL645546.2-201ENSMUST00000224526 265 ntBASIC12.6□□□□□ -0.39
Dkk1O54908 Chchd1-203ENSMUST00000224633 557 ntBASIC12.6□□□□□ -0.39
Dkk1O54908 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Dkk1O54908 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Dkk1O54908 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Dkk1O54908 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Dkk1O54908 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Dkk1O54908 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Dkk1O54908 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Dkk1O54908 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Dkk1O54908 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Dkk1O54908 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Dkk1O54908 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Dkk1O54908 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Dkk1O54908 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Dkk1O54908 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Dkk1O54908 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Dkk1O54908 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Dkk1O54908 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.6□□□□□ -0.39
Dkk1O54908 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Dkk1O54908 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Dkk1O54908 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Dkk1O54908 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Dkk1O54908 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Dkk1O54908 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Dkk1O54908 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Dkk1O54908 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Dkk1O54908 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Dkk1O54908 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Dkk1O54908 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Dkk1O54908 Gm14021-201ENSMUST00000117683 961 ntBASIC12.59□□□□□ -0.39
Dkk1O54908 Gm12017-201ENSMUST00000122453 1003 ntBASIC12.59□□□□□ -0.39
Dkk1O54908 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.59□□□□□ -0.39
Dkk1O54908 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Dkk1O54908 Rprl2-201ENSMUST00000157150 290 ntBASIC12.59□□□□□ -0.39
Dkk1O54908 Gm23777-201ENSMUST00000158994 259 ntBASIC12.59□□□□□ -0.39
Dkk1O54908 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Dkk1O54908 Gm18889-201ENSMUST00000174284 929 ntBASIC12.59□□□□□ -0.39
Dkk1O54908 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC12.59□□□□□ -0.39
Dkk1O54908 Gm27702-201ENSMUST00000184512 56 ntBASIC12.59□□□□□ -0.39
Dkk1O54908 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.59□□□□□ -0.39
Dkk1O54908 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC12.59□□□□□ -0.39
Dkk1O54908 Mir7116-201ENSMUST00000195956 70 ntBASIC12.59□□□□□ -0.39
Dkk1O54908 Gm2213-201ENSMUST00000197485 688 ntBASIC12.59□□□□□ -0.39
Dkk1O54908 Gng12-208ENSMUST00000204511 739 ntTSL 5 BASIC12.59□□□□□ -0.39
Dkk1O54908 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Dkk1O54908 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.59□□□□□ -0.39
Dkk1O54908 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Dkk1O54908 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Dkk1O54908 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Dkk1O54908 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Dkk1O54908 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Dkk1O54908 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Dkk1O54908 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Dkk1O54908 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Dkk1O54908 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Dkk1O54908 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Dkk1O54908 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Dkk1O54908 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Dkk1O54908 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Dkk1O54908 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.59□□□□□ -0.39
Dkk1O54908 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.59□□□□□ -0.39
Dkk1O54908 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Dkk1O54908 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Dkk1O54908 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Dkk1O54908 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Dkk1O54908 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Dkk1O54908 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms