Protein–RNA interactions for Protein: O09111

Ndufb11, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial, mousemouse

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb11O09111 AC166574.4-201ENSMUST00000227165 1937 ntBASIC10.97□□□□□ -0.65
Ndufb11O09111 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ndufb11O09111 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ndufb11O09111 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Ndufb11O09111 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ndufb11O09111 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ndufb11O09111 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.97□□□□□ -0.65
Ndufb11O09111 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ndufb11O09111 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ndufb11O09111 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Ndufb11O09111 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ndufb11O09111 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ndufb11O09111 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ndufb11O09111 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ndufb11O09111 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC10.97□□□□□ -0.65
Ndufb11O09111 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
Ndufb11O09111 Gm6944-201ENSMUST00000182449 1006 ntBASIC10.97□□□□□ -0.65
Ndufb11O09111 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC10.97□□□□□ -0.65
Ndufb11O09111 Gm9182-201ENSMUST00000217829 639 ntBASIC10.97□□□□□ -0.65
Ndufb11O09111 Gm9109-201ENSMUST00000120254 1405 ntBASIC10.97□□□□□ -0.65
Ndufb11O09111 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ndufb11O09111 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Ndufb11O09111 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC10.97□□□□□ -0.65
Ndufb11O09111 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ndufb11O09111 AC151895.1-201ENSMUST00000219025 1742 ntBASIC10.97□□□□□ -0.65
Ndufb11O09111 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ndufb11O09111 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ndufb11O09111 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ndufb11O09111 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Ndufb11O09111 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ndufb11O09111 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ndufb11O09111 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ndufb11O09111 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ndufb11O09111 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC10.97□□□□□ -0.65
Ndufb11O09111 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ndufb11O09111 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ndufb11O09111 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Ndufb11O09111 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ndufb11O09111 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC10.96□□□□□ -0.65
Ndufb11O09111 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ndufb11O09111 Gm28323-201ENSMUST00000186817 2499 ntBASIC10.96□□□□□ -0.65
Ndufb11O09111 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.65
Ndufb11O09111 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ndufb11O09111 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ndufb11O09111 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ndufb11O09111 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
Ndufb11O09111 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ndufb11O09111 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ndufb11O09111 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ndufb11O09111 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Ndufb11O09111 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ndufb11O09111 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ndufb11O09111 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ndufb11O09111 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Ndufb11O09111 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ndufb11O09111 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC10.96□□□□□ -0.65
Ndufb11O09111 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ndufb11O09111 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ndufb11O09111 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Ndufb11O09111 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC10.96□□□□□ -0.65
Ndufb11O09111 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ndufb11O09111 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.96□□□□□ -0.65
Ndufb11O09111 AC154649.1-201ENSMUST00000227392 384 ntBASIC10.96□□□□□ -0.65
Ndufb11O09111 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ndufb11O09111 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ndufb11O09111 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Ndufb11O09111 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Ndufb11O09111 Gm44851-201ENSMUST00000205735 2309 ntBASIC10.96□□□□□ -0.66
Ndufb11O09111 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.66
Ndufb11O09111 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC10.96□□□□□ -0.66
Ndufb11O09111 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ndufb11O09111 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ndufb11O09111 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ndufb11O09111 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ndufb11O09111 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ndufb11O09111 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ndufb11O09111 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ndufb11O09111 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Ndufb11O09111 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Ndufb11O09111 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ndufb11O09111 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ndufb11O09111 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ndufb11O09111 Gm7104-201ENSMUST00000179741 2532 ntBASIC10.95□□□□□ -0.66
Ndufb11O09111 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ndufb11O09111 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ndufb11O09111 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ndufb11O09111 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ndufb11O09111 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ndufb11O09111 Mir770-201ENSMUST00000103252 94 ntBASIC10.95□□□□□ -0.66
Ndufb11O09111 Gm12497-201ENSMUST00000138778 237 ntBASIC10.95□□□□□ -0.66
Ndufb11O09111 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ndufb11O09111 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ndufb11O09111 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC10.95□□□□□ -0.66
Ndufb11O09111 AC135637.1-201ENSMUST00000227750 365 ntBASIC10.95□□□□□ -0.66
Ndufb11O09111 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ndufb11O09111 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Ndufb11O09111 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ndufb11O09111 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ndufb11O09111 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Ndufb11O09111 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms