Protein–RNA interactions for Protein: E9Q414

Apob, Apolipoprotein B-100, mousemouse

Predictions only

Length 4,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApobE9Q414 Gm2231-201ENSMUST00000125661 612 ntBASIC8.19□□□□□ -1.1
ApobE9Q414 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
ApobE9Q414 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
ApobE9Q414 Mir433-201ENSMUST00000093564 124 ntBASIC8.19□□□□□ -1.1
ApobE9Q414 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
ApobE9Q414 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
ApobE9Q414 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
ApobE9Q414 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
ApobE9Q414 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
ApobE9Q414 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
ApobE9Q414 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC8.18□□□□□ -1.1
ApobE9Q414 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
ApobE9Q414 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
ApobE9Q414 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC8.18□□□□□ -1.1
ApobE9Q414 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
ApobE9Q414 Gm9083-201ENSMUST00000120423 819 ntBASIC8.18□□□□□ -1.1
ApobE9Q414 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC8.18□□□□□ -1.1
ApobE9Q414 Gm2383-201ENSMUST00000181461 807 ntBASIC8.18□□□□□ -1.1
ApobE9Q414 Gm37986-201ENSMUST00000193285 383 ntBASIC8.18□□□□□ -1.1
ApobE9Q414 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
ApobE9Q414 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
ApobE9Q414 Gm15889-202ENSMUST00000212669 2443 ntBASIC8.18□□□□□ -1.1
ApobE9Q414 Gm18244-201ENSMUST00000219747 1566 ntBASIC8.18□□□□□ -1.1
ApobE9Q414 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
ApobE9Q414 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
ApobE9Q414 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
ApobE9Q414 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
ApobE9Q414 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC8.18□□□□□ -1.1
ApobE9Q414 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
ApobE9Q414 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC8.18□□□□□ -1.1
ApobE9Q414 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
ApobE9Q414 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
ApobE9Q414 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
ApobE9Q414 Gm44262-201ENSMUST00000204969 372 ntBASIC8.18□□□□□ -1.1
ApobE9Q414 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
ApobE9Q414 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
ApobE9Q414 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
ApobE9Q414 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
ApobE9Q414 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
ApobE9Q414 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
ApobE9Q414 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
ApobE9Q414 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
ApobE9Q414 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
ApobE9Q414 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
ApobE9Q414 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
ApobE9Q414 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
ApobE9Q414 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
ApobE9Q414 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC8.18□□□□□ -1.1
ApobE9Q414 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
ApobE9Q414 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
ApobE9Q414 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
ApobE9Q414 Gm5466-201ENSMUST00000119395 1890 ntBASIC8.18□□□□□ -1.1
ApobE9Q414 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
ApobE9Q414 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC8.18□□□□□ -1.1
ApobE9Q414 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC8.18□□□□□ -1.1
ApobE9Q414 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
ApobE9Q414 Gm28693-202ENSMUST00000190758 331 ntBASIC8.18□□□□□ -1.1
ApobE9Q414 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
ApobE9Q414 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
ApobE9Q414 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
ApobE9Q414 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
ApobE9Q414 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC8.18□□□□□ -1.1
ApobE9Q414 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
ApobE9Q414 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
ApobE9Q414 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
ApobE9Q414 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
ApobE9Q414 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
ApobE9Q414 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC8.17□□□□□ -1.1
ApobE9Q414 Gm11667-201ENSMUST00000119828 486 ntBASIC8.17□□□□□ -1.1
ApobE9Q414 Gm45224-201ENSMUST00000208203 414 ntBASIC8.17□□□□□ -1.1
ApobE9Q414 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC8.17□□□□□ -1.1
ApobE9Q414 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
ApobE9Q414 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
ApobE9Q414 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
ApobE9Q414 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
ApobE9Q414 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
ApobE9Q414 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
ApobE9Q414 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
ApobE9Q414 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
ApobE9Q414 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
ApobE9Q414 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
ApobE9Q414 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
ApobE9Q414 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
ApobE9Q414 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC8.17□□□□□ -1.1
ApobE9Q414 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
ApobE9Q414 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC8.17□□□□□ -1.1
ApobE9Q414 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC8.17□□□□□ -1.1
ApobE9Q414 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
ApobE9Q414 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC8.17□□□□□ -1.1
ApobE9Q414 Gm2260-201ENSMUST00000184965 657 ntBASIC8.17□□□□□ -1.1
ApobE9Q414 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
ApobE9Q414 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC8.17□□□□□ -1.1
ApobE9Q414 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
ApobE9Q414 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
ApobE9Q414 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
ApobE9Q414 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC8.17□□□□□ -1.1
ApobE9Q414 Gm29340-201ENSMUST00000188763 3854 ntBASIC8.17□□□□□ -1.1
ApobE9Q414 Daam2-202ENSMUST00000224595 1926 ntBASIC8.17□□□□□ -1.1
ApobE9Q414 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC8.17□□□□□ -1.1
ApobE9Q414 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms