Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcb1Q9Z0H3 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcb1Q9Z0H3 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Smarcb1Q9Z0H3 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcb1Q9Z0H3 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcb1Q9Z0H3 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.28□□□□□ -0.12
Smarcb1Q9Z0H3 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcb1Q9Z0H3 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcb1Q9Z0H3 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smarcb1Q9Z0H3 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.27□□□□□ -0.12
Smarcb1Q9Z0H3 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.27□□□□□ -0.12
Smarcb1Q9Z0H3 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Smarcb1Q9Z0H3 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Smarcb1Q9Z0H3 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Smarcb1Q9Z0H3 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Smarcb1Q9Z0H3 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Smarcb1Q9Z0H3 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smarcb1Q9Z0H3 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smarcb1Q9Z0H3 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Smarcb1Q9Z0H3 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Smarcb1Q9Z0H3 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC14.27□□□□□ -0.13
Smarcb1Q9Z0H3 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Smarcb1Q9Z0H3 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Smarcb1Q9Z0H3 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Smarcb1Q9Z0H3 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcb1Q9Z0H3 Gm38671-201ENSMUST00000200573 130 ntBASIC14.27□□□□□ -0.13
Smarcb1Q9Z0H3 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.27□□□□□ -0.13
Smarcb1Q9Z0H3 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcb1Q9Z0H3 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.27□□□□□ -0.13
Smarcb1Q9Z0H3 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcb1Q9Z0H3 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcb1Q9Z0H3 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Smarcb1Q9Z0H3 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
Smarcb1Q9Z0H3 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcb1Q9Z0H3 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcb1Q9Z0H3 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcb1Q9Z0H3 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Smarcb1Q9Z0H3 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcb1Q9Z0H3 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcb1Q9Z0H3 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcb1Q9Z0H3 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcb1Q9Z0H3 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcb1Q9Z0H3 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcb1Q9Z0H3 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcb1Q9Z0H3 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.13
Smarcb1Q9Z0H3 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcb1Q9Z0H3 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcb1Q9Z0H3 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcb1Q9Z0H3 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcb1Q9Z0H3 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcb1Q9Z0H3 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.26□□□□□ -0.13
Smarcb1Q9Z0H3 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Smarcb1Q9Z0H3 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcb1Q9Z0H3 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Smarcb1Q9Z0H3 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcb1Q9Z0H3 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcb1Q9Z0H3 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcb1Q9Z0H3 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcb1Q9Z0H3 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcb1Q9Z0H3 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Smarcb1Q9Z0H3 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.26□□□□□ -0.13
Smarcb1Q9Z0H3 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcb1Q9Z0H3 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcb1Q9Z0H3 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcb1Q9Z0H3 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcb1Q9Z0H3 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC14.26□□□□□ -0.13
Smarcb1Q9Z0H3 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.26□□□□□ -0.13
Smarcb1Q9Z0H3 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.26□□□□□ -0.13
Smarcb1Q9Z0H3 Gm27839-201ENSMUST00000184242 106 ntBASIC14.26□□□□□ -0.13
Smarcb1Q9Z0H3 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC14.26□□□□□ -0.13
Smarcb1Q9Z0H3 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC14.26□□□□□ -0.13
Smarcb1Q9Z0H3 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.26□□□□□ -0.13
Smarcb1Q9Z0H3 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC14.26□□□□□ -0.13
Smarcb1Q9Z0H3 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcb1Q9Z0H3 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcb1Q9Z0H3 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Smarcb1Q9Z0H3 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcb1Q9Z0H3 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.26□□□□□ -0.13
Smarcb1Q9Z0H3 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcb1Q9Z0H3 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Smarcb1Q9Z0H3 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcb1Q9Z0H3 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcb1Q9Z0H3 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcb1Q9Z0H3 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Smarcb1Q9Z0H3 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.26□□□□□ -0.13
Smarcb1Q9Z0H3 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Smarcb1Q9Z0H3 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcb1Q9Z0H3 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcb1Q9Z0H3 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC14.25□□□□□ -0.13
Smarcb1Q9Z0H3 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcb1Q9Z0H3 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcb1Q9Z0H3 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcb1Q9Z0H3 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcb1Q9Z0H3 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcb1Q9Z0H3 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcb1Q9Z0H3 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcb1Q9Z0H3 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.25□□□□□ -0.13
Smarcb1Q9Z0H3 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcb1Q9Z0H3 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcb1Q9Z0H3 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms