Protein–RNA interactions for Protein: Q9D8B4

Ndufa11, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11, mousemouse

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa11Q9D8B4 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ndufa11Q9D8B4 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC11.83□□□□□ -0.52
Ndufa11Q9D8B4 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Ndufa11Q9D8B4 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ndufa11Q9D8B4 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ndufa11Q9D8B4 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ndufa11Q9D8B4 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ndufa11Q9D8B4 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ndufa11Q9D8B4 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ndufa11Q9D8B4 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC11.83□□□□□ -0.52
Ndufa11Q9D8B4 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ndufa11Q9D8B4 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ndufa11Q9D8B4 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ndufa11Q9D8B4 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ndufa11Q9D8B4 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ndufa11Q9D8B4 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufa11Q9D8B4 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufa11Q9D8B4 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufa11Q9D8B4 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufa11Q9D8B4 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufa11Q9D8B4 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Ndufa11Q9D8B4 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Ndufa11Q9D8B4 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufa11Q9D8B4 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufa11Q9D8B4 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
Ndufa11Q9D8B4 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufa11Q9D8B4 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufa11Q9D8B4 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufa11Q9D8B4 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Ndufa11Q9D8B4 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.82□□□□□ -0.52
Ndufa11Q9D8B4 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufa11Q9D8B4 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufa11Q9D8B4 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufa11Q9D8B4 Gm16011-201ENSMUST00000121567 2662 ntBASIC11.82□□□□□ -0.52
Ndufa11Q9D8B4 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufa11Q9D8B4 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufa11Q9D8B4 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Ndufa11Q9D8B4 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufa11Q9D8B4 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufa11Q9D8B4 Gm8584-201ENSMUST00000171982 758 ntBASIC11.82□□□□□ -0.52
Ndufa11Q9D8B4 Mir3547-201ENSMUST00000175461 88 ntBASIC11.82□□□□□ -0.52
Ndufa11Q9D8B4 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufa11Q9D8B4 Gm7895-201ENSMUST00000187459 1173 ntBASIC11.82□□□□□ -0.52
Ndufa11Q9D8B4 Gm37489-201ENSMUST00000191883 159 ntBASIC11.82□□□□□ -0.52
Ndufa11Q9D8B4 Gm43068-201ENSMUST00000201095 1273 ntBASIC11.82□□□□□ -0.52
Ndufa11Q9D8B4 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC11.82□□□□□ -0.52
Ndufa11Q9D8B4 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.82□□□□□ -0.52
Ndufa11Q9D8B4 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufa11Q9D8B4 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufa11Q9D8B4 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufa11Q9D8B4 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.82□□□□□ -0.52
Ndufa11Q9D8B4 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC11.82□□□□□ -0.52
Ndufa11Q9D8B4 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufa11Q9D8B4 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufa11Q9D8B4 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufa11Q9D8B4 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufa11Q9D8B4 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufa11Q9D8B4 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufa11Q9D8B4 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Ndufa11Q9D8B4 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufa11Q9D8B4 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Ndufa11Q9D8B4 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufa11Q9D8B4 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufa11Q9D8B4 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufa11Q9D8B4 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufa11Q9D8B4 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufa11Q9D8B4 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndufa11Q9D8B4 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufa11Q9D8B4 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufa11Q9D8B4 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufa11Q9D8B4 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufa11Q9D8B4 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufa11Q9D8B4 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.81□□□□□ -0.52
Ndufa11Q9D8B4 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.81□□□□□ -0.52
Ndufa11Q9D8B4 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufa11Q9D8B4 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Ndufa11Q9D8B4 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ndufa11Q9D8B4 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufa11Q9D8B4 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufa11Q9D8B4 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufa11Q9D8B4 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ndufa11Q9D8B4 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufa11Q9D8B4 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufa11Q9D8B4 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufa11Q9D8B4 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ndufa11Q9D8B4 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufa11Q9D8B4 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.81□□□□□ -0.52
Ndufa11Q9D8B4 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufa11Q9D8B4 Gm2445-201ENSMUST00000182798 989 ntBASIC11.81□□□□□ -0.52
Ndufa11Q9D8B4 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.81□□□□□ -0.52
Ndufa11Q9D8B4 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.81□□□□□ -0.52
Ndufa11Q9D8B4 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.81□□□□□ -0.52
Ndufa11Q9D8B4 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufa11Q9D8B4 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufa11Q9D8B4 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufa11Q9D8B4 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufa11Q9D8B4 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Ndufa11Q9D8B4 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufa11Q9D8B4 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ndufa11Q9D8B4 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms