Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Chmp5Q9D7S9 Gm6222-201ENSMUST00000120787 396 ntBASIC17.26■□□□□ 0.35
Chmp5Q9D7S9 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC17.26■□□□□ 0.35
Chmp5Q9D7S9 Gm17271-201ENSMUST00000165535 355 ntBASIC17.26■□□□□ 0.35
Chmp5Q9D7S9 Gm3809-201ENSMUST00000180973 1006 ntBASIC17.26■□□□□ 0.35
Chmp5Q9D7S9 AC149588.3-201ENSMUST00000227515 150 ntBASIC17.26■□□□□ 0.35
Chmp5Q9D7S9 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Chmp5Q9D7S9 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp5Q9D7S9 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Chmp5Q9D7S9 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp5Q9D7S9 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp5Q9D7S9 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp5Q9D7S9 AC154725.1-201ENSMUST00000224826 1961 ntBASIC17.26■□□□□ 0.35
Chmp5Q9D7S9 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp5Q9D7S9 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp5Q9D7S9 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Chmp5Q9D7S9 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Chmp5Q9D7S9 Gm8337-201ENSMUST00000187358 1938 ntBASIC17.25■□□□□ 0.35
Chmp5Q9D7S9 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp5Q9D7S9 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp5Q9D7S9 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp5Q9D7S9 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp5Q9D7S9 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp5Q9D7S9 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp5Q9D7S9 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp5Q9D7S9 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp5Q9D7S9 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC17.25■□□□□ 0.35
Chmp5Q9D7S9 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp5Q9D7S9 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp5Q9D7S9 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp5Q9D7S9 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.25■□□□□ 0.35
Chmp5Q9D7S9 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp5Q9D7S9 Gm29741-201ENSMUST00000192667 421 ntBASIC17.25■□□□□ 0.35
Chmp5Q9D7S9 Gm45612-201ENSMUST00000211320 160 ntBASIC17.25■□□□□ 0.35
Chmp5Q9D7S9 Bloc1s5-203ENSMUST00000224902 612 ntBASIC17.25■□□□□ 0.35
Chmp5Q9D7S9 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp5Q9D7S9 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp5Q9D7S9 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Chmp5Q9D7S9 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp5Q9D7S9 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp5Q9D7S9 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC17.25■□□□□ 0.35
Chmp5Q9D7S9 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp5Q9D7S9 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC17.25■□□□□ 0.35
Chmp5Q9D7S9 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp5Q9D7S9 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp5Q9D7S9 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Chmp5Q9D7S9 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp5Q9D7S9 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp5Q9D7S9 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp5Q9D7S9 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp5Q9D7S9 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp5Q9D7S9 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp5Q9D7S9 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp5Q9D7S9 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp5Q9D7S9 Gm12260-201ENSMUST00000122447 411 ntBASIC17.24■□□□□ 0.35
Chmp5Q9D7S9 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp5Q9D7S9 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC17.24■□□□□ 0.35
Chmp5Q9D7S9 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp5Q9D7S9 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC17.24■□□□□ 0.35
Chmp5Q9D7S9 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC17.24■□□□□ 0.35
Chmp5Q9D7S9 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp5Q9D7S9 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp5Q9D7S9 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp5Q9D7S9 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp5Q9D7S9 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp5Q9D7S9 Gm45638-201ENSMUST00000211507 2878 ntBASIC17.24■□□□□ 0.35
Chmp5Q9D7S9 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp5Q9D7S9 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Chmp5Q9D7S9 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Chmp5Q9D7S9 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp5Q9D7S9 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp5Q9D7S9 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC17.23■□□□□ 0.35
Chmp5Q9D7S9 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Chmp5Q9D7S9 Nrn1-204ENSMUST00000224323 1779 ntBASIC17.23■□□□□ 0.35
Chmp5Q9D7S9 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp5Q9D7S9 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp5Q9D7S9 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC17.23■□□□□ 0.35
Chmp5Q9D7S9 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp5Q9D7S9 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Chmp5Q9D7S9 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp5Q9D7S9 Gm18027-201ENSMUST00000218947 619 ntBASIC17.23■□□□□ 0.35
Chmp5Q9D7S9 Gm5628-201ENSMUST00000222318 1049 ntBASIC17.23■□□□□ 0.35
Chmp5Q9D7S9 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp5Q9D7S9 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Chmp5Q9D7S9 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp5Q9D7S9 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Chmp5Q9D7S9 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp5Q9D7S9 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp5Q9D7S9 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp5Q9D7S9 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp5Q9D7S9 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Chmp5Q9D7S9 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp5Q9D7S9 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp5Q9D7S9 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp5Q9D7S9 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp5Q9D7S9 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp5Q9D7S9 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp5Q9D7S9 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp5Q9D7S9 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Chmp5Q9D7S9 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms