Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Trim8Q99PJ2 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim8Q99PJ2 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trim8Q99PJ2 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim8Q99PJ2 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim8Q99PJ2 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim8Q99PJ2 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim8Q99PJ2 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Trim8Q99PJ2 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim8Q99PJ2 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trim8Q99PJ2 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim8Q99PJ2 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim8Q99PJ2 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim8Q99PJ2 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.53□□□□□ -0.24
Trim8Q99PJ2 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim8Q99PJ2 Gm11543-201ENSMUST00000120758 370 ntBASIC13.53□□□□□ -0.24
Trim8Q99PJ2 Gm14822-201ENSMUST00000122247 291 ntBASIC13.53□□□□□ -0.24
Trim8Q99PJ2 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.53□□□□□ -0.24
Trim8Q99PJ2 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.53□□□□□ -0.24
Trim8Q99PJ2 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.53□□□□□ -0.24
Trim8Q99PJ2 Gm6736-201ENSMUST00000166583 948 ntBASIC13.53□□□□□ -0.24
Trim8Q99PJ2 Mir8117-201ENSMUST00000184773 107 ntBASIC13.53□□□□□ -0.24
Trim8Q99PJ2 Gm27397-201ENSMUST00000184997 107 ntBASIC13.53□□□□□ -0.24
Trim8Q99PJ2 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trim8Q99PJ2 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trim8Q99PJ2 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Trim8Q99PJ2 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim8Q99PJ2 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim8Q99PJ2 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim8Q99PJ2 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim8Q99PJ2 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim8Q99PJ2 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim8Q99PJ2 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim8Q99PJ2 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
Trim8Q99PJ2 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.53□□□□□ -0.24
Trim8Q99PJ2 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim8Q99PJ2 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim8Q99PJ2 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim8Q99PJ2 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.53□□□□□ -0.24
Trim8Q99PJ2 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.53□□□□□ -0.24
Trim8Q99PJ2 Gm4780-202ENSMUST00000215200 2644 ntBASIC13.53□□□□□ -0.24
Trim8Q99PJ2 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim8Q99PJ2 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trim8Q99PJ2 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim8Q99PJ2 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trim8Q99PJ2 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim8Q99PJ2 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim8Q99PJ2 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim8Q99PJ2 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim8Q99PJ2 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.52□□□□□ -0.24
Trim8Q99PJ2 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim8Q99PJ2 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim8Q99PJ2 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Trim8Q99PJ2 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trim8Q99PJ2 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim8Q99PJ2 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim8Q99PJ2 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim8Q99PJ2 Gm24513-201ENSMUST00000174964 138 ntBASIC13.52□□□□□ -0.25
Trim8Q99PJ2 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trim8Q99PJ2 Gm29310-201ENSMUST00000185468 696 ntBASIC13.52□□□□□ -0.25
Trim8Q99PJ2 Gm21825-201ENSMUST00000185728 696 ntBASIC13.52□□□□□ -0.25
Trim8Q99PJ2 Gm29109-201ENSMUST00000185895 696 ntBASIC13.52□□□□□ -0.25
Trim8Q99PJ2 Gm21896-201ENSMUST00000186520 696 ntBASIC13.52□□□□□ -0.25
Trim8Q99PJ2 Gm21873-201ENSMUST00000186728 696 ntBASIC13.52□□□□□ -0.25
Trim8Q99PJ2 Gm21794-201ENSMUST00000187056 696 ntBASIC13.52□□□□□ -0.25
Trim8Q99PJ2 Gm21880-201ENSMUST00000187275 696 ntBASIC13.52□□□□□ -0.25
Trim8Q99PJ2 Gm21826-201ENSMUST00000187451 696 ntBASIC13.52□□□□□ -0.25
Trim8Q99PJ2 Gm21198-201ENSMUST00000188393 696 ntBASIC13.52□□□□□ -0.25
Trim8Q99PJ2 Gm21749-201ENSMUST00000189343 696 ntBASIC13.52□□□□□ -0.25
Trim8Q99PJ2 Gm21901-201ENSMUST00000189568 696 ntBASIC13.52□□□□□ -0.25
Trim8Q99PJ2 Gm29424-201ENSMUST00000189716 696 ntBASIC13.52□□□□□ -0.25
Trim8Q99PJ2 Gm28599-201ENSMUST00000189838 694 ntBASIC13.52□□□□□ -0.25
Trim8Q99PJ2 Gm21867-201ENSMUST00000189917 696 ntBASIC13.52□□□□□ -0.25
Trim8Q99PJ2 Gm29269-201ENSMUST00000190087 696 ntBASIC13.52□□□□□ -0.25
Trim8Q99PJ2 Gm21722-201ENSMUST00000190153 696 ntBASIC13.52□□□□□ -0.25
Trim8Q99PJ2 Gm28423-201ENSMUST00000190701 696 ntBASIC13.52□□□□□ -0.25
Trim8Q99PJ2 Gm21899-201ENSMUST00000190745 696 ntBASIC13.52□□□□□ -0.25
Trim8Q99PJ2 Gm21910-201ENSMUST00000191163 696 ntBASIC13.52□□□□□ -0.25
Trim8Q99PJ2 Gm21849-201ENSMUST00000191571 696 ntBASIC13.52□□□□□ -0.25
Trim8Q99PJ2 Gm28678-201ENSMUST00000191593 696 ntBASIC13.52□□□□□ -0.25
Trim8Q99PJ2 Gm20910-201ENSMUST00000193268 696 ntBASIC13.52□□□□□ -0.25
Trim8Q99PJ2 Gm21871-201ENSMUST00000194621 696 ntBASIC13.52□□□□□ -0.25
Trim8Q99PJ2 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.52□□□□□ -0.25
Trim8Q99PJ2 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.52□□□□□ -0.25
Trim8Q99PJ2 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim8Q99PJ2 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim8Q99PJ2 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.52□□□□□ -0.25
Trim8Q99PJ2 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trim8Q99PJ2 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.25
Trim8Q99PJ2 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.52□□□□□ -0.25
Trim8Q99PJ2 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim8Q99PJ2 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trim8Q99PJ2 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim8Q99PJ2 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.52□□□□□ -0.25
Trim8Q99PJ2 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.52□□□□□ -0.25
Trim8Q99PJ2 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim8Q99PJ2 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim8Q99PJ2 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim8Q99PJ2 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim8Q99PJ2 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms