Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col25a1Q99MQ5 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col25a1Q99MQ5 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col25a1Q99MQ5 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Col25a1Q99MQ5 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col25a1Q99MQ5 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
Col25a1Q99MQ5 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.27□□□□□ -0.13
Col25a1Q99MQ5 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col25a1Q99MQ5 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Col25a1Q99MQ5 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col25a1Q99MQ5 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Col25a1Q99MQ5 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Col25a1Q99MQ5 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col25a1Q99MQ5 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col25a1Q99MQ5 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Col25a1Q99MQ5 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col25a1Q99MQ5 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Col25a1Q99MQ5 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col25a1Q99MQ5 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col25a1Q99MQ5 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col25a1Q99MQ5 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col25a1Q99MQ5 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col25a1Q99MQ5 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Col25a1Q99MQ5 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
Col25a1Q99MQ5 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col25a1Q99MQ5 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col25a1Q99MQ5 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col25a1Q99MQ5 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col25a1Q99MQ5 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Col25a1Q99MQ5 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.26□□□□□ -0.13
Col25a1Q99MQ5 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col25a1Q99MQ5 Gm13297-201ENSMUST00000120205 934 ntBASIC14.26□□□□□ -0.13
Col25a1Q99MQ5 Gm12715-201ENSMUST00000121430 1128 ntBASIC14.26□□□□□ -0.13
Col25a1Q99MQ5 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC14.26□□□□□ -0.13
Col25a1Q99MQ5 Gm9550-201ENSMUST00000161130 862 ntBASIC14.26□□□□□ -0.13
Col25a1Q99MQ5 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col25a1Q99MQ5 Mir6958-201ENSMUST00000184207 73 ntBASIC14.26□□□□□ -0.13
Col25a1Q99MQ5 Gm21470-201ENSMUST00000187680 696 ntBASIC14.26□□□□□ -0.13
Col25a1Q99MQ5 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC14.26□□□□□ -0.13
Col25a1Q99MQ5 Gm8598-201ENSMUST00000221184 836 ntBASIC14.26□□□□□ -0.13
Col25a1Q99MQ5 AC154462.2-201ENSMUST00000227519 370 ntBASIC14.26□□□□□ -0.13
Col25a1Q99MQ5 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col25a1Q99MQ5 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col25a1Q99MQ5 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Col25a1Q99MQ5 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.26□□□□□ -0.13
Col25a1Q99MQ5 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col25a1Q99MQ5 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Col25a1Q99MQ5 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col25a1Q99MQ5 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.26□□□□□ -0.13
Col25a1Q99MQ5 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col25a1Q99MQ5 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Col25a1Q99MQ5 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Col25a1Q99MQ5 Gm9279-201ENSMUST00000223175 1606 ntBASIC14.26□□□□□ -0.13
Col25a1Q99MQ5 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col25a1Q99MQ5 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col25a1Q99MQ5 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col25a1Q99MQ5 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col25a1Q99MQ5 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.25□□□□□ -0.13
Col25a1Q99MQ5 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.25□□□□□ -0.13
Col25a1Q99MQ5 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col25a1Q99MQ5 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col25a1Q99MQ5 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC14.25□□□□□ -0.13
Col25a1Q99MQ5 Gm12208-201ENSMUST00000122004 163 ntBASIC14.25□□□□□ -0.13
Col25a1Q99MQ5 n-R5s14-201ENSMUST00000122688 107 ntBASIC14.25□□□□□ -0.13
Col25a1Q99MQ5 Gm20426-201ENSMUST00000173657 440 ntBASIC14.25□□□□□ -0.13
Col25a1Q99MQ5 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col25a1Q99MQ5 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC14.25□□□□□ -0.13
Col25a1Q99MQ5 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col25a1Q99MQ5 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col25a1Q99MQ5 Gm21769-201ENSMUST00000211922 111 ntBASIC14.25□□□□□ -0.13
Col25a1Q99MQ5 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.25□□□□□ -0.13
Col25a1Q99MQ5 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col25a1Q99MQ5 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col25a1Q99MQ5 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Col25a1Q99MQ5 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC14.25□□□□□ -0.13
Col25a1Q99MQ5 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col25a1Q99MQ5 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.25□□□□□ -0.13
Col25a1Q99MQ5 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col25a1Q99MQ5 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Col25a1Q99MQ5 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Col25a1Q99MQ5 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col25a1Q99MQ5 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Col25a1Q99MQ5 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col25a1Q99MQ5 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col25a1Q99MQ5 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col25a1Q99MQ5 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col25a1Q99MQ5 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col25a1Q99MQ5 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Col25a1Q99MQ5 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col25a1Q99MQ5 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col25a1Q99MQ5 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col25a1Q99MQ5 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col25a1Q99MQ5 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.24□□□□□ -0.13
Col25a1Q99MQ5 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col25a1Q99MQ5 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col25a1Q99MQ5 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col25a1Q99MQ5 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col25a1Q99MQ5 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col25a1Q99MQ5 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col25a1Q99MQ5 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms