Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf111Q99ML9 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf111Q99ML9 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf111Q99ML9 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Rnf111Q99ML9 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf111Q99ML9 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf111Q99ML9 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf111Q99ML9 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf111Q99ML9 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.4□□□□□ -0.26
Rnf111Q99ML9 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf111Q99ML9 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf111Q99ML9 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf111Q99ML9 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf111Q99ML9 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf111Q99ML9 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf111Q99ML9 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf111Q99ML9 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf111Q99ML9 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Rnf111Q99ML9 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf111Q99ML9 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.4□□□□□ -0.26
Rnf111Q99ML9 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Rnf111Q99ML9 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf111Q99ML9 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Rnf111Q99ML9 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf111Q99ML9 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf111Q99ML9 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf111Q99ML9 Gm13823-201ENSMUST00000119930 345 ntBASIC13.4□□□□□ -0.26
Rnf111Q99ML9 Gm6222-201ENSMUST00000120787 396 ntBASIC13.4□□□□□ -0.26
Rnf111Q99ML9 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.4□□□□□ -0.26
Rnf111Q99ML9 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf111Q99ML9 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.4□□□□□ -0.26
Rnf111Q99ML9 Gm5779-201ENSMUST00000218467 910 ntBASIC13.4□□□□□ -0.26
Rnf111Q99ML9 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf111Q99ML9 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Rnf111Q99ML9 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf111Q99ML9 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf111Q99ML9 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf111Q99ML9 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.4□□□□□ -0.26
Rnf111Q99ML9 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf111Q99ML9 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Rnf111Q99ML9 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf111Q99ML9 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf111Q99ML9 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf111Q99ML9 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.4□□□□□ -0.26
Rnf111Q99ML9 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.39□□□□□ -0.27
Rnf111Q99ML9 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.39□□□□□ -0.27
Rnf111Q99ML9 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf111Q99ML9 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf111Q99ML9 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf111Q99ML9 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf111Q99ML9 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Rnf111Q99ML9 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf111Q99ML9 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf111Q99ML9 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf111Q99ML9 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf111Q99ML9 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf111Q99ML9 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf111Q99ML9 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf111Q99ML9 Mir449b-201ENSMUST00000104833 80 ntBASIC13.39□□□□□ -0.27
Rnf111Q99ML9 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Rnf111Q99ML9 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf111Q99ML9 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf111Q99ML9 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Rnf111Q99ML9 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf111Q99ML9 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.39□□□□□ -0.27
Rnf111Q99ML9 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf111Q99ML9 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Rnf111Q99ML9 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf111Q99ML9 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.39□□□□□ -0.27
Rnf111Q99ML9 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf111Q99ML9 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf111Q99ML9 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.39□□□□□ -0.27
Rnf111Q99ML9 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Rnf111Q99ML9 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf111Q99ML9 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf111Q99ML9 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf111Q99ML9 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf111Q99ML9 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf111Q99ML9 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf111Q99ML9 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf111Q99ML9 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.39□□□□□ -0.27
Rnf111Q99ML9 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf111Q99ML9 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf111Q99ML9 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf111Q99ML9 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf111Q99ML9 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf111Q99ML9 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf111Q99ML9 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf111Q99ML9 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Rnf111Q99ML9 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf111Q99ML9 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Rnf111Q99ML9 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.38□□□□□ -0.27
Rnf111Q99ML9 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.38□□□□□ -0.27
Rnf111Q99ML9 Gm18766-201ENSMUST00000189811 808 ntBASIC13.38□□□□□ -0.27
Rnf111Q99ML9 Gm29541-201ENSMUST00000191351 678 ntBASIC13.38□□□□□ -0.27
Rnf111Q99ML9 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf111Q99ML9 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Rnf111Q99ML9 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf111Q99ML9 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf111Q99ML9 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms