Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RtcbQ99LF4 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RtcbQ99LF4 AC153366.2-201ENSMUST00000219461 1984 ntBASIC16.95■□□□□ 0.3
RtcbQ99LF4 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RtcbQ99LF4 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RtcbQ99LF4 Gm43579-201ENSMUST00000202387 1307 ntBASIC16.95■□□□□ 0.3
RtcbQ99LF4 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RtcbQ99LF4 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RtcbQ99LF4 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RtcbQ99LF4 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RtcbQ99LF4 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
RtcbQ99LF4 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RtcbQ99LF4 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RtcbQ99LF4 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RtcbQ99LF4 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
RtcbQ99LF4 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC16.94■□□□□ 0.3
RtcbQ99LF4 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RtcbQ99LF4 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RtcbQ99LF4 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
RtcbQ99LF4 Gm15370-201ENSMUST00000117158 253 ntBASIC16.94■□□□□ 0.3
RtcbQ99LF4 Gm14381-201ENSMUST00000122105 414 ntBASIC16.94■□□□□ 0.3
RtcbQ99LF4 Gm12749-201ENSMUST00000122138 1159 ntBASIC16.94■□□□□ 0.3
RtcbQ99LF4 Gm18753-201ENSMUST00000201000 566 ntBASIC16.94■□□□□ 0.3
RtcbQ99LF4 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RtcbQ99LF4 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RtcbQ99LF4 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RtcbQ99LF4 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RtcbQ99LF4 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RtcbQ99LF4 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RtcbQ99LF4 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RtcbQ99LF4 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC16.93■□□□□ 0.3
RtcbQ99LF4 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC16.93■□□□□ 0.3
RtcbQ99LF4 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RtcbQ99LF4 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC16.93■□□□□ 0.3
RtcbQ99LF4 Gm13886-201ENSMUST00000117876 1183 ntBASIC16.93■□□□□ 0.3
RtcbQ99LF4 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
RtcbQ99LF4 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RtcbQ99LF4 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC16.93■□□□□ 0.3
RtcbQ99LF4 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RtcbQ99LF4 Gm6222-202ENSMUST00000182143 629 ntBASIC16.93■□□□□ 0.3
RtcbQ99LF4 Gm6621-201ENSMUST00000193251 772 ntBASIC16.93■□□□□ 0.3
RtcbQ99LF4 Gm38158-201ENSMUST00000194617 339 ntBASIC16.93■□□□□ 0.3
RtcbQ99LF4 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RtcbQ99LF4 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RtcbQ99LF4 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RtcbQ99LF4 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RtcbQ99LF4 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
RtcbQ99LF4 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RtcbQ99LF4 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
RtcbQ99LF4 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RtcbQ99LF4 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RtcbQ99LF4 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC16.93■□□□□ 0.3
RtcbQ99LF4 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RtcbQ99LF4 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RtcbQ99LF4 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RtcbQ99LF4 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RtcbQ99LF4 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RtcbQ99LF4 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RtcbQ99LF4 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RtcbQ99LF4 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RtcbQ99LF4 Gm6023-201ENSMUST00000118217 606 ntBASIC16.92■□□□□ 0.3
RtcbQ99LF4 Gm13123-201ENSMUST00000122173 492 ntBASIC16.92■□□□□ 0.3
RtcbQ99LF4 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RtcbQ99LF4 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RtcbQ99LF4 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RtcbQ99LF4 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC16.92■□□□□ 0.3
RtcbQ99LF4 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC16.92■□□□□ 0.3
RtcbQ99LF4 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
RtcbQ99LF4 Gm43068-201ENSMUST00000201095 1273 ntBASIC16.92■□□□□ 0.3
RtcbQ99LF4 Gm44064-201ENSMUST00000204964 1087 ntBASIC16.92■□□□□ 0.3
RtcbQ99LF4 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC16.92■□□□□ 0.3
RtcbQ99LF4 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RtcbQ99LF4 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RtcbQ99LF4 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RtcbQ99LF4 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RtcbQ99LF4 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RtcbQ99LF4 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RtcbQ99LF4 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RtcbQ99LF4 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RtcbQ99LF4 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
RtcbQ99LF4 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RtcbQ99LF4 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RtcbQ99LF4 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RtcbQ99LF4 Gm44207-201ENSMUST00000204568 1424 ntBASIC16.91■□□□□ 0.3
RtcbQ99LF4 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
RtcbQ99LF4 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
RtcbQ99LF4 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
RtcbQ99LF4 Gm14350-201ENSMUST00000116642 640 ntBASIC16.91■□□□□ 0.3
RtcbQ99LF4 Gm13297-201ENSMUST00000120205 934 ntBASIC16.91■□□□□ 0.3
RtcbQ99LF4 Gm11658-201ENSMUST00000120913 1008 ntBASIC16.91■□□□□ 0.3
RtcbQ99LF4 Gm2467-201ENSMUST00000182266 1010 ntBASIC16.91■□□□□ 0.3
RtcbQ99LF4 Gm6981-201ENSMUST00000182467 1008 ntBASIC16.91■□□□□ 0.3
RtcbQ99LF4 Gm37489-201ENSMUST00000191883 159 ntBASIC16.91■□□□□ 0.3
RtcbQ99LF4 AC132384.14-201ENSMUST00000219346 1147 ntBASIC16.91■□□□□ 0.3
RtcbQ99LF4 AC173210.1-201ENSMUST00000222341 1131 ntBASIC16.91■□□□□ 0.3
RtcbQ99LF4 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RtcbQ99LF4 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
RtcbQ99LF4 n-R5s195-201ENSMUST00000082891 119 ntBASIC16.91■□□□□ 0.3
RtcbQ99LF4 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RtcbQ99LF4 Gm20632-201ENSMUST00000176760 2427 ntBASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms