Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col20a1Q923P0 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
Col20a1Q923P0 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col20a1Q923P0 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC16.24■□□□□ 0.19
Col20a1Q923P0 Gm8652-201ENSMUST00000181363 964 ntBASIC16.24■□□□□ 0.19
Col20a1Q923P0 Mir7085-201ENSMUST00000184353 66 ntBASIC16.24■□□□□ 0.19
Col20a1Q923P0 Gm38144-201ENSMUST00000192790 465 ntBASIC16.24■□□□□ 0.19
Col20a1Q923P0 Gm38671-201ENSMUST00000200573 130 ntBASIC16.24■□□□□ 0.19
Col20a1Q923P0 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
Col20a1Q923P0 Gm17870-201ENSMUST00000219489 1174 ntBASIC16.24■□□□□ 0.19
Col20a1Q923P0 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Col20a1Q923P0 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col20a1Q923P0 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col20a1Q923P0 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col20a1Q923P0 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col20a1Q923P0 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col20a1Q923P0 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col20a1Q923P0 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col20a1Q923P0 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col20a1Q923P0 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col20a1Q923P0 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC16.24■□□□□ 0.19
Col20a1Q923P0 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Col20a1Q923P0 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Col20a1Q923P0 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col20a1Q923P0 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col20a1Q923P0 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col20a1Q923P0 AC073947.2-201ENSMUST00000215888 1130 ntBASIC16.23■□□□□ 0.19
Col20a1Q923P0 AC153962.4-201ENSMUST00000217878 242 ntBASIC16.23■□□□□ 0.19
Col20a1Q923P0 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col20a1Q923P0 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col20a1Q923P0 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col20a1Q923P0 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col20a1Q923P0 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Col20a1Q923P0 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col20a1Q923P0 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col20a1Q923P0 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col20a1Q923P0 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col20a1Q923P0 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Col20a1Q923P0 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col20a1Q923P0 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Col20a1Q923P0 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col20a1Q923P0 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Col20a1Q923P0 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col20a1Q923P0 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col20a1Q923P0 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Col20a1Q923P0 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col20a1Q923P0 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col20a1Q923P0 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Col20a1Q923P0 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC16.23■□□□□ 0.19
Col20a1Q923P0 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC16.23■□□□□ 0.19
Col20a1Q923P0 Gm21451-201ENSMUST00000111062 2775 ntBASIC16.23■□□□□ 0.19
Col20a1Q923P0 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col20a1Q923P0 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col20a1Q923P0 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Col20a1Q923P0 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
Col20a1Q923P0 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Col20a1Q923P0 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Col20a1Q923P0 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Col20a1Q923P0 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Col20a1Q923P0 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Col20a1Q923P0 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Col20a1Q923P0 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Col20a1Q923P0 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col20a1Q923P0 Gm24196-201ENSMUST00000179161 110 ntBASIC16.22■□□□□ 0.19
Col20a1Q923P0 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Col20a1Q923P0 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col20a1Q923P0 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC16.22■□□□□ 0.19
Col20a1Q923P0 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col20a1Q923P0 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC16.22■□□□□ 0.19
Col20a1Q923P0 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC16.22■□□□□ 0.19
Col20a1Q923P0 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Col20a1Q923P0 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col20a1Q923P0 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col20a1Q923P0 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col20a1Q923P0 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Col20a1Q923P0 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Col20a1Q923P0 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col20a1Q923P0 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col20a1Q923P0 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col20a1Q923P0 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col20a1Q923P0 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC16.22■□□□□ 0.19
Col20a1Q923P0 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Col20a1Q923P0 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col20a1Q923P0 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Col20a1Q923P0 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Col20a1Q923P0 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col20a1Q923P0 Gm15889-202ENSMUST00000212669 2443 ntBASIC16.22■□□□□ 0.19
Col20a1Q923P0 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Col20a1Q923P0 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Col20a1Q923P0 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Col20a1Q923P0 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Col20a1Q923P0 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col20a1Q923P0 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col20a1Q923P0 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Col20a1Q923P0 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col20a1Q923P0 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col20a1Q923P0 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col20a1Q923P0 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col20a1Q923P0 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
Col20a1Q923P0 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms