Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.66□□□□□ -0.06
Pcdha9Q91Y11 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Pcdha9Q91Y11 Gm25925-201ENSMUST00000158314 306 ntBASIC14.66□□□□□ -0.06
Pcdha9Q91Y11 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdha9Q91Y11 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdha9Q91Y11 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.66□□□□□ -0.06
Pcdha9Q91Y11 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.66□□□□□ -0.06
Pcdha9Q91Y11 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdha9Q91Y11 Gm6218-201ENSMUST00000219812 628 ntBASIC14.66□□□□□ -0.06
Pcdha9Q91Y11 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdha9Q91Y11 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.66□□□□□ -0.06
Pcdha9Q91Y11 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdha9Q91Y11 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdha9Q91Y11 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdha9Q91Y11 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
Pcdha9Q91Y11 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Pcdha9Q91Y11 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdha9Q91Y11 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.66□□□□□ -0.06
Pcdha9Q91Y11 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdha9Q91Y11 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Pcdha9Q91Y11 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdha9Q91Y11 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
Pcdha9Q91Y11 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdha9Q91Y11 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdha9Q91Y11 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdha9Q91Y11 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdha9Q91Y11 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdha9Q91Y11 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdha9Q91Y11 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.65□□□□□ -0.06
Pcdha9Q91Y11 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdha9Q91Y11 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdha9Q91Y11 Syt7-205ENSMUST00000224135 1557 ntBASIC14.65□□□□□ -0.06
Pcdha9Q91Y11 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.65□□□□□ -0.06
Pcdha9Q91Y11 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdha9Q91Y11 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.65□□□□□ -0.06
Pcdha9Q91Y11 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.65□□□□□ -0.06
Pcdha9Q91Y11 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.65□□□□□ -0.06
Pcdha9Q91Y11 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdha9Q91Y11 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14.65□□□□□ -0.06
Pcdha9Q91Y11 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdha9Q91Y11 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.65□□□□□ -0.06
Pcdha9Q91Y11 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdha9Q91Y11 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdha9Q91Y11 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdha9Q91Y11 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
Pcdha9Q91Y11 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdha9Q91Y11 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdha9Q91Y11 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdha9Q91Y11 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Pcdha9Q91Y11 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdha9Q91Y11 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdha9Q91Y11 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdha9Q91Y11 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdha9Q91Y11 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Pcdha9Q91Y11 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdha9Q91Y11 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Pcdha9Q91Y11 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha9Q91Y11 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha9Q91Y11 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.64□□□□□ -0.07
Pcdha9Q91Y11 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha9Q91Y11 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha9Q91Y11 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha9Q91Y11 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha9Q91Y11 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha9Q91Y11 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Pcdha9Q91Y11 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha9Q91Y11 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.64□□□□□ -0.07
Pcdha9Q91Y11 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha9Q91Y11 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha9Q91Y11 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.64□□□□□ -0.07
Pcdha9Q91Y11 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.64□□□□□ -0.07
Pcdha9Q91Y11 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.64□□□□□ -0.07
Pcdha9Q91Y11 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha9Q91Y11 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha9Q91Y11 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha9Q91Y11 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.64□□□□□ -0.07
Pcdha9Q91Y11 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha9Q91Y11 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha9Q91Y11 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha9Q91Y11 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha9Q91Y11 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Pcdha9Q91Y11 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha9Q91Y11 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha9Q91Y11 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha9Q91Y11 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha9Q91Y11 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.63□□□□□ -0.07
Pcdha9Q91Y11 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha9Q91Y11 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha9Q91Y11 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.63□□□□□ -0.07
Pcdha9Q91Y11 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha9Q91Y11 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.63□□□□□ -0.07
Pcdha9Q91Y11 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha9Q91Y11 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha9Q91Y11 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha9Q91Y11 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha9Q91Y11 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha9Q91Y11 Gm7488-201ENSMUST00000117148 684 ntBASIC14.63□□□□□ -0.07
Pcdha9Q91Y11 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Pcdha9Q91Y11 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Pcdha9Q91Y11 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms