Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga4Q91XY4 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Pcdhga4Q91XY4 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Pcdhga4Q91XY4 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga4Q91XY4 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga4Q91XY4 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Pcdhga4Q91XY4 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.63□□□□□ -0.23
Pcdhga4Q91XY4 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga4Q91XY4 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.63□□□□□ -0.23
Pcdhga4Q91XY4 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga4Q91XY4 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.63□□□□□ -0.23
Pcdhga4Q91XY4 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga4Q91XY4 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Pcdhga4Q91XY4 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga4Q91XY4 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga4Q91XY4 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga4Q91XY4 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga4Q91XY4 Gm12428-201ENSMUST00000119844 727 ntBASIC13.63□□□□□ -0.23
Pcdhga4Q91XY4 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.63□□□□□ -0.23
Pcdhga4Q91XY4 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga4Q91XY4 Gm33320-201ENSMUST00000192232 530 ntBASIC13.63□□□□□ -0.23
Pcdhga4Q91XY4 Gm5425-201ENSMUST00000214125 459 ntBASIC13.63□□□□□ -0.23
Pcdhga4Q91XY4 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.63□□□□□ -0.23
Pcdhga4Q91XY4 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga4Q91XY4 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Pcdhga4Q91XY4 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga4Q91XY4 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga4Q91XY4 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga4Q91XY4 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Pcdhga4Q91XY4 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga4Q91XY4 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga4Q91XY4 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.63□□□□□ -0.23
Pcdhga4Q91XY4 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga4Q91XY4 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga4Q91XY4 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
Pcdhga4Q91XY4 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga4Q91XY4 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga4Q91XY4 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga4Q91XY4 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga4Q91XY4 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga4Q91XY4 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga4Q91XY4 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga4Q91XY4 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga4Q91XY4 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdhga4Q91XY4 Gm12585-201ENSMUST00000117307 290 ntBASIC13.62□□□□□ -0.23
Pcdhga4Q91XY4 Gm14719-201ENSMUST00000121891 340 ntBASIC13.62□□□□□ -0.23
Pcdhga4Q91XY4 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Pcdhga4Q91XY4 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.62□□□□□ -0.23
Pcdhga4Q91XY4 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.62□□□□□ -0.23
Pcdhga4Q91XY4 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga4Q91XY4 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Pcdhga4Q91XY4 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga4Q91XY4 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga4Q91XY4 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga4Q91XY4 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga4Q91XY4 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga4Q91XY4 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Pcdhga4Q91XY4 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga4Q91XY4 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga4Q91XY4 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga4Q91XY4 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Pcdhga4Q91XY4 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Pcdhga4Q91XY4 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Pcdhga4Q91XY4 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
Pcdhga4Q91XY4 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga4Q91XY4 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga4Q91XY4 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga4Q91XY4 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga4Q91XY4 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga4Q91XY4 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga4Q91XY4 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga4Q91XY4 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga4Q91XY4 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga4Q91XY4 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga4Q91XY4 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga4Q91XY4 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Pcdhga4Q91XY4 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga4Q91XY4 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Pcdhga4Q91XY4 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga4Q91XY4 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga4Q91XY4 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga4Q91XY4 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga4Q91XY4 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.61□□□□□ -0.23
Pcdhga4Q91XY4 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga4Q91XY4 Gm15393-201ENSMUST00000120499 219 ntBASIC13.61□□□□□ -0.23
Pcdhga4Q91XY4 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga4Q91XY4 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.61□□□□□ -0.23
Pcdhga4Q91XY4 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga4Q91XY4 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.61□□□□□ -0.23
Pcdhga4Q91XY4 Gm5866-201ENSMUST00000177881 973 ntBASIC13.61□□□□□ -0.23
Pcdhga4Q91XY4 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.61□□□□□ -0.23
Pcdhga4Q91XY4 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.61□□□□□ -0.23
Pcdhga4Q91XY4 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.61□□□□□ -0.23
Pcdhga4Q91XY4 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga4Q91XY4 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.61□□□□□ -0.23
Pcdhga4Q91XY4 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga4Q91XY4 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga4Q91XY4 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga4Q91XY4 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga4Q91XY4 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms