Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps39Q8R5L3 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps39Q8R5L3 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Vps39Q8R5L3 Gm8410-201ENSMUST00000117225 605 ntBASIC13.84□□□□□ -0.19
Vps39Q8R5L3 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.84□□□□□ -0.19
Vps39Q8R5L3 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.84□□□□□ -0.19
Vps39Q8R5L3 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps39Q8R5L3 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.84□□□□□ -0.19
Vps39Q8R5L3 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Vps39Q8R5L3 Gm6916-202ENSMUST00000205523 195 ntBASIC13.84□□□□□ -0.19
Vps39Q8R5L3 Chchd1-203ENSMUST00000224633 557 ntBASIC13.84□□□□□ -0.19
Vps39Q8R5L3 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps39Q8R5L3 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Vps39Q8R5L3 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Vps39Q8R5L3 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps39Q8R5L3 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Vps39Q8R5L3 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Vps39Q8R5L3 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Vps39Q8R5L3 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Vps39Q8R5L3 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Vps39Q8R5L3 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps39Q8R5L3 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps39Q8R5L3 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps39Q8R5L3 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps39Q8R5L3 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Vps39Q8R5L3 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Vps39Q8R5L3 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Vps39Q8R5L3 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Vps39Q8R5L3 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Vps39Q8R5L3 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Vps39Q8R5L3 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Vps39Q8R5L3 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps39Q8R5L3 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps39Q8R5L3 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
Vps39Q8R5L3 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps39Q8R5L3 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps39Q8R5L3 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps39Q8R5L3 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Vps39Q8R5L3 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps39Q8R5L3 Gm15653-201ENSMUST00000119247 907 ntBASIC13.83□□□□□ -0.2
Vps39Q8R5L3 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Vps39Q8R5L3 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps39Q8R5L3 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.83□□□□□ -0.2
Vps39Q8R5L3 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Vps39Q8R5L3 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.83□□□□□ -0.2
Vps39Q8R5L3 Gm33320-201ENSMUST00000192232 530 ntBASIC13.83□□□□□ -0.2
Vps39Q8R5L3 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.83□□□□□ -0.2
Vps39Q8R5L3 Gm5312-201ENSMUST00000203728 547 ntBASIC13.83□□□□□ -0.2
Vps39Q8R5L3 Gm5779-201ENSMUST00000218467 910 ntBASIC13.83□□□□□ -0.2
Vps39Q8R5L3 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps39Q8R5L3 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Vps39Q8R5L3 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Vps39Q8R5L3 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps39Q8R5L3 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Vps39Q8R5L3 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps39Q8R5L3 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps39Q8R5L3 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps39Q8R5L3 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps39Q8R5L3 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Vps39Q8R5L3 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps39Q8R5L3 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps39Q8R5L3 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps39Q8R5L3 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps39Q8R5L3 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Vps39Q8R5L3 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps39Q8R5L3 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Vps39Q8R5L3 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vps39Q8R5L3 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps39Q8R5L3 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps39Q8R5L3 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Vps39Q8R5L3 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps39Q8R5L3 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.82□□□□□ -0.2
Vps39Q8R5L3 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps39Q8R5L3 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps39Q8R5L3 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.82□□□□□ -0.2
Vps39Q8R5L3 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps39Q8R5L3 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps39Q8R5L3 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps39Q8R5L3 Mir449b-201ENSMUST00000104833 80 ntBASIC13.82□□□□□ -0.2
Vps39Q8R5L3 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps39Q8R5L3 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Vps39Q8R5L3 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Vps39Q8R5L3 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vps39Q8R5L3 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps39Q8R5L3 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vps39Q8R5L3 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.82□□□□□ -0.2
Vps39Q8R5L3 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.82□□□□□ -0.2
Vps39Q8R5L3 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps39Q8R5L3 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps39Q8R5L3 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps39Q8R5L3 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps39Q8R5L3 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps39Q8R5L3 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps39Q8R5L3 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Vps39Q8R5L3 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vps39Q8R5L3 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps39Q8R5L3 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.82□□□□□ -0.2
Vps39Q8R5L3 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps39Q8R5L3 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vps39Q8R5L3 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms