Protein–RNA interactions for Protein: Q8R3V6

Cuedc1, CUE domain-containing protein 1, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cuedc1Q8R3V6 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cuedc1Q8R3V6 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cuedc1Q8R3V6 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Cuedc1Q8R3V6 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cuedc1Q8R3V6 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cuedc1Q8R3V6 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cuedc1Q8R3V6 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cuedc1Q8R3V6 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.64□□□□□ -0.39
Cuedc1Q8R3V6 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cuedc1Q8R3V6 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cuedc1Q8R3V6 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cuedc1Q8R3V6 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cuedc1Q8R3V6 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cuedc1Q8R3V6 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cuedc1Q8R3V6 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cuedc1Q8R3V6 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cuedc1Q8R3V6 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cuedc1Q8R3V6 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cuedc1Q8R3V6 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cuedc1Q8R3V6 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cuedc1Q8R3V6 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cuedc1Q8R3V6 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cuedc1Q8R3V6 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cuedc1Q8R3V6 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cuedc1Q8R3V6 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Cuedc1Q8R3V6 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.64□□□□□ -0.39
Cuedc1Q8R3V6 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC12.64□□□□□ -0.39
Cuedc1Q8R3V6 Gm4984-201ENSMUST00000115987 360 ntBASIC12.64□□□□□ -0.39
Cuedc1Q8R3V6 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.64□□□□□ -0.39
Cuedc1Q8R3V6 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.64□□□□□ -0.39
Cuedc1Q8R3V6 Mir6420-201ENSMUST00000185032 102 ntBASIC12.64□□□□□ -0.39
Cuedc1Q8R3V6 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.64□□□□□ -0.39
Cuedc1Q8R3V6 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.64□□□□□ -0.39
Cuedc1Q8R3V6 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.64□□□□□ -0.39
Cuedc1Q8R3V6 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cuedc1Q8R3V6 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cuedc1Q8R3V6 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Cuedc1Q8R3V6 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.64□□□□□ -0.39
Cuedc1Q8R3V6 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cuedc1Q8R3V6 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.64□□□□□ -0.39
Cuedc1Q8R3V6 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cuedc1Q8R3V6 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cuedc1Q8R3V6 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cuedc1Q8R3V6 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.64□□□□□ -0.39
Cuedc1Q8R3V6 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cuedc1Q8R3V6 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cuedc1Q8R3V6 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cuedc1Q8R3V6 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cuedc1Q8R3V6 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cuedc1Q8R3V6 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cuedc1Q8R3V6 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cuedc1Q8R3V6 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cuedc1Q8R3V6 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Cuedc1Q8R3V6 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cuedc1Q8R3V6 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cuedc1Q8R3V6 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cuedc1Q8R3V6 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cuedc1Q8R3V6 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
Cuedc1Q8R3V6 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cuedc1Q8R3V6 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cuedc1Q8R3V6 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cuedc1Q8R3V6 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cuedc1Q8R3V6 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cuedc1Q8R3V6 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cuedc1Q8R3V6 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cuedc1Q8R3V6 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cuedc1Q8R3V6 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cuedc1Q8R3V6 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cuedc1Q8R3V6 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cuedc1Q8R3V6 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Cuedc1Q8R3V6 Carlr-201ENSMUST00000181515 2574 ntBASIC12.63□□□□□ -0.39
Cuedc1Q8R3V6 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cuedc1Q8R3V6 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cuedc1Q8R3V6 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Cuedc1Q8R3V6 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Cuedc1Q8R3V6 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Cuedc1Q8R3V6 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Cuedc1Q8R3V6 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cuedc1Q8R3V6 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.63□□□□□ -0.39
Cuedc1Q8R3V6 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.63□□□□□ -0.39
Cuedc1Q8R3V6 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.63□□□□□ -0.39
Cuedc1Q8R3V6 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cuedc1Q8R3V6 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cuedc1Q8R3V6 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.63□□□□□ -0.39
Cuedc1Q8R3V6 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Cuedc1Q8R3V6 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Cuedc1Q8R3V6 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.63□□□□□ -0.39
Cuedc1Q8R3V6 Gm45841-201ENSMUST00000207700 164 ntBASIC12.63□□□□□ -0.39
Cuedc1Q8R3V6 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cuedc1Q8R3V6 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.63□□□□□ -0.39
Cuedc1Q8R3V6 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cuedc1Q8R3V6 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.63□□□□□ -0.39
Cuedc1Q8R3V6 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cuedc1Q8R3V6 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cuedc1Q8R3V6 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cuedc1Q8R3V6 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cuedc1Q8R3V6 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cuedc1Q8R3V6 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cuedc1Q8R3V6 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cuedc1Q8R3V6 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms