Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.83□□□□□ -0.35
H2afjQ8R1M2 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.83□□□□□ -0.35
H2afjQ8R1M2 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
H2afjQ8R1M2 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
H2afjQ8R1M2 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
H2afjQ8R1M2 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afjQ8R1M2 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afjQ8R1M2 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afjQ8R1M2 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afjQ8R1M2 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afjQ8R1M2 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afjQ8R1M2 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afjQ8R1M2 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afjQ8R1M2 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
H2afjQ8R1M2 Gm11745-201ENSMUST00000121669 448 ntBASIC12.83□□□□□ -0.36
H2afjQ8R1M2 Gm12882-201ENSMUST00000121696 517 ntBASIC12.83□□□□□ -0.36
H2afjQ8R1M2 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
H2afjQ8R1M2 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.83□□□□□ -0.36
H2afjQ8R1M2 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.83□□□□□ -0.36
H2afjQ8R1M2 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.83□□□□□ -0.36
H2afjQ8R1M2 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afjQ8R1M2 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afjQ8R1M2 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
H2afjQ8R1M2 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afjQ8R1M2 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.83□□□□□ -0.36
H2afjQ8R1M2 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afjQ8R1M2 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afjQ8R1M2 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afjQ8R1M2 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
H2afjQ8R1M2 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.83□□□□□ -0.36
H2afjQ8R1M2 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afjQ8R1M2 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afjQ8R1M2 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afjQ8R1M2 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afjQ8R1M2 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.83□□□□□ -0.36
H2afjQ8R1M2 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.83□□□□□ -0.36
H2afjQ8R1M2 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afjQ8R1M2 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afjQ8R1M2 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afjQ8R1M2 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
H2afjQ8R1M2 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.83□□□□□ -0.36
H2afjQ8R1M2 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
H2afjQ8R1M2 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afjQ8R1M2 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.82□□□□□ -0.36
H2afjQ8R1M2 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.82□□□□□ -0.36
H2afjQ8R1M2 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
H2afjQ8R1M2 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afjQ8R1M2 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afjQ8R1M2 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afjQ8R1M2 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afjQ8R1M2 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afjQ8R1M2 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afjQ8R1M2 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afjQ8R1M2 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afjQ8R1M2 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
H2afjQ8R1M2 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afjQ8R1M2 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afjQ8R1M2 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afjQ8R1M2 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afjQ8R1M2 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afjQ8R1M2 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC12.82□□□□□ -0.36
H2afjQ8R1M2 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC12.82□□□□□ -0.36
H2afjQ8R1M2 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
H2afjQ8R1M2 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
H2afjQ8R1M2 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afjQ8R1M2 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
H2afjQ8R1M2 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afjQ8R1M2 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
H2afjQ8R1M2 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
H2afjQ8R1M2 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afjQ8R1M2 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
H2afjQ8R1M2 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.82□□□□□ -0.36
H2afjQ8R1M2 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afjQ8R1M2 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.82□□□□□ -0.36
H2afjQ8R1M2 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
H2afjQ8R1M2 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afjQ8R1M2 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.82□□□□□ -0.36
H2afjQ8R1M2 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
H2afjQ8R1M2 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.82□□□□□ -0.36
H2afjQ8R1M2 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afjQ8R1M2 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afjQ8R1M2 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afjQ8R1M2 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.81□□□□□ -0.36
H2afjQ8R1M2 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afjQ8R1M2 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afjQ8R1M2 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
H2afjQ8R1M2 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
H2afjQ8R1M2 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
H2afjQ8R1M2 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
H2afjQ8R1M2 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.81□□□□□ -0.36
H2afjQ8R1M2 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afjQ8R1M2 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afjQ8R1M2 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
H2afjQ8R1M2 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afjQ8R1M2 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
H2afjQ8R1M2 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
H2afjQ8R1M2 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
H2afjQ8R1M2 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC12.81□□□□□ -0.36
H2afjQ8R1M2 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.81□□□□□ -0.36
H2afjQ8R1M2 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms