Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp44Q8C2S0 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Usp44Q8C2S0 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp44Q8C2S0 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp44Q8C2S0 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Usp44Q8C2S0 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Usp44Q8C2S0 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp44Q8C2S0 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp44Q8C2S0 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp44Q8C2S0 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Usp44Q8C2S0 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Usp44Q8C2S0 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Usp44Q8C2S0 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Usp44Q8C2S0 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Usp44Q8C2S0 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC16.13■□□□□ 0.17
Usp44Q8C2S0 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Usp44Q8C2S0 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Usp44Q8C2S0 Gm26464-201ENSMUST00000157094 305 ntBASIC16.13■□□□□ 0.17
Usp44Q8C2S0 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC16.13■□□□□ 0.17
Usp44Q8C2S0 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Usp44Q8C2S0 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Usp44Q8C2S0 Gm5354-201ENSMUST00000182417 973 ntBASIC16.13■□□□□ 0.17
Usp44Q8C2S0 Mir6977-201ENSMUST00000184960 64 ntBASIC16.13■□□□□ 0.17
Usp44Q8C2S0 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Usp44Q8C2S0 Gm6473-201ENSMUST00000188572 1210 ntBASIC16.13■□□□□ 0.17
Usp44Q8C2S0 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC16.13■□□□□ 0.17
Usp44Q8C2S0 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Usp44Q8C2S0 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp44Q8C2S0 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp44Q8C2S0 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Usp44Q8C2S0 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp44Q8C2S0 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC16.13■□□□□ 0.17
Usp44Q8C2S0 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp44Q8C2S0 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp44Q8C2S0 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp44Q8C2S0 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Usp44Q8C2S0 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp44Q8C2S0 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp44Q8C2S0 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp44Q8C2S0 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp44Q8C2S0 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Usp44Q8C2S0 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp44Q8C2S0 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Usp44Q8C2S0 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Usp44Q8C2S0 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Usp44Q8C2S0 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Usp44Q8C2S0 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Usp44Q8C2S0 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Usp44Q8C2S0 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Usp44Q8C2S0 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Usp44Q8C2S0 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Usp44Q8C2S0 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Usp44Q8C2S0 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Usp44Q8C2S0 Gm7488-201ENSMUST00000117148 684 ntBASIC16.12■□□□□ 0.17
Usp44Q8C2S0 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Usp44Q8C2S0 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Usp44Q8C2S0 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Usp44Q8C2S0 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Usp44Q8C2S0 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Usp44Q8C2S0 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Usp44Q8C2S0 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Usp44Q8C2S0 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC16.12■□□□□ 0.17
Usp44Q8C2S0 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Usp44Q8C2S0 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Usp44Q8C2S0 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Usp44Q8C2S0 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Usp44Q8C2S0 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Usp44Q8C2S0 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Usp44Q8C2S0 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Usp44Q8C2S0 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Usp44Q8C2S0 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Usp44Q8C2S0 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Usp44Q8C2S0 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Usp44Q8C2S0 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Usp44Q8C2S0 Ldha-ps-201ENSMUST00000119390 995 ntBASIC16.11■□□□□ 0.17
Usp44Q8C2S0 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC16.11■□□□□ 0.17
Usp44Q8C2S0 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Usp44Q8C2S0 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Usp44Q8C2S0 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC16.11■□□□□ 0.17
Usp44Q8C2S0 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Usp44Q8C2S0 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Usp44Q8C2S0 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Usp44Q8C2S0 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Usp44Q8C2S0 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Usp44Q8C2S0 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Usp44Q8C2S0 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Usp44Q8C2S0 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Usp44Q8C2S0 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Usp44Q8C2S0 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Usp44Q8C2S0 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Usp44Q8C2S0 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Usp44Q8C2S0 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Usp44Q8C2S0 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp44Q8C2S0 AC154527.2-201ENSMUST00000225256 1466 ntBASIC16.1■□□□□ 0.17
Usp44Q8C2S0 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp44Q8C2S0 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp44Q8C2S0 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp44Q8C2S0 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC16.1■□□□□ 0.17
Usp44Q8C2S0 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp44Q8C2S0 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms